Gene : Cagra.0003s0029 C. grandiflora v1.1
Defline:  (1 of 5) PTHR10826:SF4 - GLYCOPROTEIN FAMILY PROTEIN Genomic Order:  29
Name:  ? Cagra.0003s0029 Secondary Identifier:  ? PAC:28913330
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0003s0029 0.5kb upstream 0.5kb upstream 1794 true Scaffold3: 96593-98386 Capsella grandiflora
Cagra.0003s0029 0.5kb upstream 0.5kb upstream 500 false Scaffold3: 97887-98386 Capsella grandiflora
Cagra.0003s0029 0.5kb downstream 0.5kb downstream 1794 true Scaffold3: 96093-97886 Capsella grandiflora
Cagra.0003s0029 0.5kb downstream 0.5kb downstream 500 false Scaffold3: 96093-96592 Capsella grandiflora
Cagra.0003s0029 1.0kb upstream 1.0kb upstream 2294 true Scaffold3: 96593-98886 Capsella grandiflora
Cagra.0003s0029 1.0kb upstream 1.0kb upstream 1000 false Scaffold3: 97887-98886 Capsella grandiflora
Cagra.0003s0029 1.0kb downstream 1.0kb downstream 2294 true Scaffold3: 95593-97886 Capsella grandiflora
Cagra.0003s0029 1.0kb downstream 1.0kb downstream 1000 false Scaffold3: 95593-96592 Capsella grandiflora
Cagra.0003s0029 2.0kb upstream 2.0kb upstream 3294 true Scaffold3: 96593-99886 Capsella grandiflora
Cagra.0003s0029 2.0kb upstream 2.0kb upstream 2000 false Scaffold3: 97887-99886 Capsella grandiflora
Cagra.0003s0029 2.0kb downstream 2.0kb downstream 3294 true Scaffold3: 94593-97886 Capsella grandiflora
Cagra.0003s0029 2.0kb downstream 2.0kb downstream 2000 false Scaffold3: 94593-96592 Capsella grandiflora
Cagra.0003s0029 5.0kb upstream 5.0kb upstream 6294 true Scaffold3: 96593-102886 Capsella grandiflora
Cagra.0003s0029 5.0kb upstream 5.0kb upstream 5000 false Scaffold3: 97887-102886 Capsella grandiflora
Cagra.0003s0029 5.0kb downstream 5.0kb downstream 6294 true Scaffold3: 91593-97886 Capsella grandiflora
Cagra.0003s0029 5.0kb downstream 5.0kb downstream 5000 false Scaffold3: 91593-96592 Capsella grandiflora
Cagra.0003s0029 10.0kb upstream 10.0kb upstream 11294 true Scaffold3: 96593-107886 Capsella grandiflora
Cagra.0003s0029 10.0kb upstream 10.0kb upstream 10000 false Scaffold3: 97887-107886 Capsella grandiflora
Cagra.0003s0029 10.0kb downstream 10.0kb downstream 11294 true Scaffold3: 86593-97886 Capsella grandiflora
Cagra.0003s0029 10.0kb downstream 10.0kb downstream 10000 false Scaffold3: 86593-96592 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379464 5261 Brassicaceae View MSA
123839135 5264 Brassicales-Malvales View MSA
124344298 5266 SBM View MSA
124237889 5268 Malvidae View MSA
124063426 5270 Rosid View MSA
123740355 5271 Pentapetalae View MSA
122797199 5272 Eudicot View MSA
122041854 5273 Angiosperm View MSA
121348815 5274 Embryophyte View MSA
123426635 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain