Gene : Cagra.0053s0012 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12947:SF4 - REGULATOR OF FREE UBIQUITIN CHAINS 1 Genomic Order:  12
Name:  ? Cagra.0053s0012 Secondary Identifier:  ? PAC:28907022
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0053s0012 0.5kb upstream 0.5kb upstream 4358 true Scaffold53: 40039-44396 Capsella grandiflora
Cagra.0053s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold53: 40039-40538 Capsella grandiflora
Cagra.0053s0012 0.5kb downstream 0.5kb downstream 4358 true Scaffold53: 40539-44896 Capsella grandiflora
Cagra.0053s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold53: 44397-44896 Capsella grandiflora
Cagra.0053s0012 1.0kb upstream 1.0kb upstream 4858 true Scaffold53: 39539-44396 Capsella grandiflora
Cagra.0053s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold53: 39539-40538 Capsella grandiflora
Cagra.0053s0012 1.0kb downstream 1.0kb downstream 4858 true Scaffold53: 40539-45396 Capsella grandiflora
Cagra.0053s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold53: 44397-45396 Capsella grandiflora
Cagra.0053s0012 2.0kb upstream 2.0kb upstream 5858 true Scaffold53: 38539-44396 Capsella grandiflora
Cagra.0053s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold53: 38539-40538 Capsella grandiflora
Cagra.0053s0012 2.0kb downstream 2.0kb downstream 5858 true Scaffold53: 40539-46396 Capsella grandiflora
Cagra.0053s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold53: 44397-46396 Capsella grandiflora
Cagra.0053s0012 5.0kb upstream 5.0kb upstream 8858 true Scaffold53: 35539-44396 Capsella grandiflora
Cagra.0053s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold53: 35539-40538 Capsella grandiflora
Cagra.0053s0012 5.0kb downstream 5.0kb downstream 8858 true Scaffold53: 40539-49396 Capsella grandiflora
Cagra.0053s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold53: 44397-49396 Capsella grandiflora
Cagra.0053s0012 10.0kb upstream 10.0kb upstream 13858 true Scaffold53: 30539-44396 Capsella grandiflora
Cagra.0053s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold53: 30539-40538 Capsella grandiflora
Cagra.0053s0012 10.0kb downstream 10.0kb downstream 13858 true Scaffold53: 40539-54396 Capsella grandiflora
Cagra.0053s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold53: 44397-54396 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365281 5261 Brassicaceae View MSA
123828764 5264 Brassicales-Malvales View MSA
124339683 5266 SBM View MSA
124253598 5268 Malvidae View MSA
124061741 5270 Rosid View MSA
123740701 5271 Pentapetalae View MSA
122792659 5272 Eudicot View MSA
122049356 5273 Angiosperm View MSA
121351478 5274 Embryophyte View MSA
123425499 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain