Gene : Cagra.0068s0001 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11706:SF46 - METAL TRANSPORTER NRAMP2-RELATED Genomic Order:  1
Name:  ? Cagra.0068s0001 Secondary Identifier:  ? PAC:28916343
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0068s0001 0.5kb upstream 0.5kb upstream 2885 true Scaffold68: 2437-5321 Capsella grandiflora
Cagra.0068s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold68: 2437-2936 Capsella grandiflora
Cagra.0068s0001 0.5kb downstream 0.5kb downstream 2885 true Scaffold68: 2937-5821 Capsella grandiflora
Cagra.0068s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold68: 5322-5821 Capsella grandiflora
Cagra.0068s0001 1.0kb upstream 1.0kb upstream 3385 true Scaffold68: 1937-5321 Capsella grandiflora
Cagra.0068s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold68: 1937-2936 Capsella grandiflora
Cagra.0068s0001 1.0kb downstream 1.0kb downstream 3385 true Scaffold68: 2937-6321 Capsella grandiflora
Cagra.0068s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold68: 5322-6321 Capsella grandiflora
Cagra.0068s0001 2.0kb upstream 2.0kb upstream 4385 true Scaffold68: 937-5321 Capsella grandiflora
Cagra.0068s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold68: 937-2936 Capsella grandiflora
Cagra.0068s0001 2.0kb downstream 2.0kb downstream 4385 true Scaffold68: 2937-7321 Capsella grandiflora
Cagra.0068s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold68: 5322-7321 Capsella grandiflora
Cagra.0068s0001 5.0kb upstream 5.0kb upstream 5321 true Scaffold68: 1-5321 Capsella grandiflora
Cagra.0068s0001 5.0kb upstream 5.0kb upstream 2936 false Scaffold68: 1-2936 Capsella grandiflora
Cagra.0068s0001 5.0kb downstream 5.0kb downstream 7385 true Scaffold68: 2937-10321 Capsella grandiflora
Cagra.0068s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold68: 5322-10321 Capsella grandiflora
Cagra.0068s0001 10.0kb upstream 10.0kb upstream 5321 true Scaffold68: 1-5321 Capsella grandiflora
Cagra.0068s0001 10.0kb upstream 10.0kb upstream 2936 false Scaffold68: 1-2936 Capsella grandiflora
Cagra.0068s0001 10.0kb downstream 10.0kb downstream 12385 true Scaffold68: 2937-15321 Capsella grandiflora
Cagra.0068s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold68: 5322-15321 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360440 5261 Brassicaceae View MSA
123839987 5264 Brassicales-Malvales View MSA
124351289 5266 SBM View MSA
124250238 5268 Malvidae View MSA
124067553 5270 Rosid View MSA
123745753 5271 Pentapetalae View MSA
122790542 5272 Eudicot View MSA
122045270 5273 Angiosperm View MSA
121347104 5274 Embryophyte View MSA
123426907 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain