Gene : Araha.44147s0001 A. halleri v1.1
Defline:  (1 of 1) PTHR23023:SF121 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA11-RELATED Genomic Order:  1
Name:  ? Araha.44147s0001 Secondary Identifier:  ? PAC:28842152
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWYDQC-4 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.44147s0001 0.5kb upstream 0.5kb upstream 1828 true Scaffold44147: 898-2725 Arabidopsis halleri
Araha.44147s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold44147: 2226-2725 Arabidopsis halleri
Araha.44147s0001 0.5kb downstream 0.5kb downstream 1828 true Scaffold44147: 398-2225 Arabidopsis halleri
Araha.44147s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold44147: 398-897 Arabidopsis halleri
Araha.44147s0001 1.0kb upstream 1.0kb upstream 2328 true Scaffold44147: 898-3225 Arabidopsis halleri
Araha.44147s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold44147: 2226-3225 Arabidopsis halleri
Araha.44147s0001 1.0kb downstream 1.0kb downstream 2225 true Scaffold44147: 1-2225 Arabidopsis halleri
Araha.44147s0001 1.0kb downstream 1.0kb downstream 897 false Scaffold44147: 1-897 Arabidopsis halleri
Araha.44147s0001 2.0kb upstream 2.0kb upstream 3328 true Scaffold44147: 898-4225 Arabidopsis halleri
Araha.44147s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold44147: 2226-4225 Arabidopsis halleri
Araha.44147s0001 2.0kb downstream 2.0kb downstream 2225 true Scaffold44147: 1-2225 Arabidopsis halleri
Araha.44147s0001 2.0kb downstream 2.0kb downstream 897 false Scaffold44147: 1-897 Arabidopsis halleri
Araha.44147s0001 5.0kb upstream 5.0kb upstream 3676 true Scaffold44147: 898-4573 Arabidopsis halleri
Araha.44147s0001 5.0kb upstream 5.0kb upstream 2348 false Scaffold44147: 2226-4573 Arabidopsis halleri
Araha.44147s0001 5.0kb downstream 5.0kb downstream 2225 true Scaffold44147: 1-2225 Arabidopsis halleri
Araha.44147s0001 5.0kb downstream 5.0kb downstream 897 false Scaffold44147: 1-897 Arabidopsis halleri
Araha.44147s0001 10.0kb upstream 10.0kb upstream 3676 true Scaffold44147: 898-4573 Arabidopsis halleri
Araha.44147s0001 10.0kb upstream 10.0kb upstream 2348 false Scaffold44147: 2226-4573 Arabidopsis halleri
Araha.44147s0001 10.0kb downstream 10.0kb downstream 2225 true Scaffold44147: 1-2225 Arabidopsis halleri
Araha.44147s0001 10.0kb downstream 10.0kb downstream 897 false Scaffold44147: 1-897 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378737 5261 Brassicaceae View MSA
123835695 5264 Brassicales-Malvales View MSA
124349496 5266 SBM View MSA
124250017 5268 Malvidae View MSA
124069751 5270 Rosid View MSA
123749752 5271 Pentapetalae View MSA
122794899 5272 Eudicot View MSA
122047342 5273 Angiosperm View MSA
121310731 5274 Embryophyte View MSA
123348144 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain