Gene : Araha.18268s0002 A. halleri v1.1

Defline:  (1 of 2) PTHR13468:SF1 - PROTEIN DEK Genomic Order:  2
Name:  ? Araha.18268s0002 Secondary Identifier:  ? PAC:28863317

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.18268s0002 0.5kb upstream 0.5kb upstream 5528 true Scaffold18268: 6736-12263 Arabidopsis halleri
Araha.18268s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold18268: 6736-7235 Arabidopsis halleri
Araha.18268s0002 0.5kb downstream 0.5kb downstream 5528 true Scaffold18268: 7236-12763 Arabidopsis halleri
Araha.18268s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold18268: 12264-12763 Arabidopsis halleri
Araha.18268s0002 1.0kb upstream 1.0kb upstream 6028 true Scaffold18268: 6236-12263 Arabidopsis halleri
Araha.18268s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold18268: 6236-7235 Arabidopsis halleri
Araha.18268s0002 1.0kb downstream 1.0kb downstream 6028 true Scaffold18268: 7236-13263 Arabidopsis halleri
Araha.18268s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold18268: 12264-13263 Arabidopsis halleri
Araha.18268s0002 2.0kb upstream 2.0kb upstream 7028 true Scaffold18268: 5236-12263 Arabidopsis halleri
Araha.18268s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold18268: 5236-7235 Arabidopsis halleri
Araha.18268s0002 2.0kb downstream 2.0kb downstream 7028 true Scaffold18268: 7236-14263 Arabidopsis halleri
Araha.18268s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold18268: 12264-14263 Arabidopsis halleri
Araha.18268s0002 5.0kb upstream 5.0kb upstream 10028 true Scaffold18268: 2236-12263 Arabidopsis halleri
Araha.18268s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold18268: 2236-7235 Arabidopsis halleri
Araha.18268s0002 5.0kb downstream 5.0kb downstream 10028 true Scaffold18268: 7236-17263 Arabidopsis halleri
Araha.18268s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold18268: 12264-17263 Arabidopsis halleri
Araha.18268s0002 10.0kb upstream 10.0kb upstream 12263 true Scaffold18268: 1-12263 Arabidopsis halleri
Araha.18268s0002 10.0kb upstream 10.0kb upstream 7235 false Scaffold18268: 1-7235 Arabidopsis halleri
Araha.18268s0002 10.0kb downstream 10.0kb downstream 15028 true Scaffold18268: 7236-22263 Arabidopsis halleri
Araha.18268s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold18268: 12264-22263 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375735 5261 Brassicaceae View MSA
123839695 5264 Brassicales-Malvales View MSA
124350029 5266 SBM View MSA
124251106 5268 Malvidae View MSA
124072894 5270 Rosid View MSA
123748946 5271 Pentapetalae View MSA
122791456 5272 Eudicot View MSA
122042773 5273 Angiosperm View MSA
121346519 5274 Embryophyte View MSA
123426401 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain