Gene : Araha.14613s0002 A. halleri v1.1
Defline:  (1 of 1) 2.5.1.115 - Homogentisate phytyltransferase / HPT Genomic Order:  2
Name:  ? Araha.14613s0002 Secondary Identifier:  ? PAC:28843771
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-1422 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.14613s0002 0.5kb upstream 0.5kb upstream 3407 true Scaffold14613: 8733-12139 Arabidopsis halleri
Araha.14613s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold14613: 11640-12139 Arabidopsis halleri
Araha.14613s0002 0.5kb downstream 0.5kb downstream 3407 true Scaffold14613: 8233-11639 Arabidopsis halleri
Araha.14613s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold14613: 8233-8732 Arabidopsis halleri
Araha.14613s0002 1.0kb upstream 1.0kb upstream 3907 true Scaffold14613: 8733-12639 Arabidopsis halleri
Araha.14613s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold14613: 11640-12639 Arabidopsis halleri
Araha.14613s0002 1.0kb downstream 1.0kb downstream 3907 true Scaffold14613: 7733-11639 Arabidopsis halleri
Araha.14613s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold14613: 7733-8732 Arabidopsis halleri
Araha.14613s0002 2.0kb upstream 2.0kb upstream 4907 true Scaffold14613: 8733-13639 Arabidopsis halleri
Araha.14613s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold14613: 11640-13639 Arabidopsis halleri
Araha.14613s0002 2.0kb downstream 2.0kb downstream 4907 true Scaffold14613: 6733-11639 Arabidopsis halleri
Araha.14613s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold14613: 6733-8732 Arabidopsis halleri
Araha.14613s0002 5.0kb upstream 5.0kb upstream 7465 true Scaffold14613: 8733-16197 Arabidopsis halleri
Araha.14613s0002 5.0kb upstream 5.0kb upstream 4558 false Scaffold14613: 11640-16197 Arabidopsis halleri
Araha.14613s0002 5.0kb downstream 5.0kb downstream 7907 true Scaffold14613: 3733-11639 Arabidopsis halleri
Araha.14613s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold14613: 3733-8732 Arabidopsis halleri
Araha.14613s0002 10.0kb upstream 10.0kb upstream 7465 true Scaffold14613: 8733-16197 Arabidopsis halleri
Araha.14613s0002 10.0kb upstream 10.0kb upstream 4558 false Scaffold14613: 11640-16197 Arabidopsis halleri
Araha.14613s0002 10.0kb downstream 10.0kb downstream 11639 true Scaffold14613: 1-11639 Arabidopsis halleri
Araha.14613s0002 10.0kb downstream 10.0kb downstream 8732 false Scaffold14613: 1-8732 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361831 5261 Brassicaceae View MSA
123829047 5264 Brassicales-Malvales View MSA
124346176 5266 SBM View MSA
124238838 5268 Malvidae View MSA
124061099 5270 Rosid View MSA
123745017 5271 Pentapetalae View MSA
122786578 5272 Eudicot View MSA
122051505 5273 Angiosperm View MSA
121349227 5274 Embryophyte View MSA
123426888 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain