Gene : Araha.12450s0004 A. halleri v1.1

Defline:  (1 of 2) 5.2.1.2 - Maleylacetoacetate isomerase / Maleylacetone isomerase Genomic Order:  4
Name:  ? Araha.12450s0004 Secondary Identifier:  ? PAC:28851615

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-6842 Arabidopsis halleri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.12450s0004 0.5kb upstream 0.5kb upstream 3961 true Scaffold12450: 7832-11792 Arabidopsis halleri
Araha.12450s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold12450: 7832-8331 Arabidopsis halleri
Araha.12450s0004 0.5kb downstream 0.5kb downstream 3961 true Scaffold12450: 8332-12292 Arabidopsis halleri
Araha.12450s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold12450: 11793-12292 Arabidopsis halleri
Araha.12450s0004 1.0kb upstream 1.0kb upstream 4461 true Scaffold12450: 7332-11792 Arabidopsis halleri
Araha.12450s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold12450: 7332-8331 Arabidopsis halleri
Araha.12450s0004 1.0kb downstream 1.0kb downstream 4461 true Scaffold12450: 8332-12792 Arabidopsis halleri
Araha.12450s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold12450: 11793-12792 Arabidopsis halleri
Araha.12450s0004 2.0kb upstream 2.0kb upstream 5461 true Scaffold12450: 6332-11792 Arabidopsis halleri
Araha.12450s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold12450: 6332-8331 Arabidopsis halleri
Araha.12450s0004 2.0kb downstream 2.0kb downstream 5461 true Scaffold12450: 8332-13792 Arabidopsis halleri
Araha.12450s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold12450: 11793-13792 Arabidopsis halleri
Araha.12450s0004 5.0kb upstream 5.0kb upstream 8461 true Scaffold12450: 3332-11792 Arabidopsis halleri
Araha.12450s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold12450: 3332-8331 Arabidopsis halleri
Araha.12450s0004 5.0kb downstream 5.0kb downstream 8461 true Scaffold12450: 8332-16792 Arabidopsis halleri
Araha.12450s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold12450: 11793-16792 Arabidopsis halleri
Araha.12450s0004 10.0kb upstream 10.0kb upstream 11792 true Scaffold12450: 1-11792 Arabidopsis halleri
Araha.12450s0004 10.0kb upstream 10.0kb upstream 8331 false Scaffold12450: 1-8331 Arabidopsis halleri
Araha.12450s0004 10.0kb downstream 10.0kb downstream 13461 true Scaffold12450: 8332-21792 Arabidopsis halleri
Araha.12450s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold12450: 11793-21792 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370990 5261 Brassicaceae View MSA
123837764 5264 Brassicales-Malvales View MSA
124338446 5266 SBM View MSA
124241210 5268 Malvidae View MSA
124061228 5270 Rosid View MSA
123751741 5271 Pentapetalae View MSA
122788376 5272 Eudicot View MSA
122050643 5273 Angiosperm View MSA
123429086 5275 Viridiplantae View MSA
121345924 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain