Gene : Araha.11756s0442 A. halleri v1.1
Defline:  (1 of 1) PTHR11451:SF3 - PROLINE--TRNA LIGASE, MITOCHONDRIAL-RELATED Genomic Order:  442
Name:  ? Araha.11756s0442 Secondary Identifier:  ? PAC:28856239
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri TRNA-CHARGING-PWY Arabidopsis halleri pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.11756s0442 0.5kb upstream 0.5kb upstream 2219 true Scaffold11756: 636306-638524 Arabidopsis halleri
Araha.11756s0442 0.5kb upstream 0.5kb upstream 500 false Scaffold11756: 638025-638524 Arabidopsis halleri
Araha.11756s0442 0.5kb downstream 0.5kb downstream 2219 true Scaffold11756: 635806-638024 Arabidopsis halleri
Araha.11756s0442 0.5kb downstream 0.5kb downstream 500 false Scaffold11756: 635806-636305 Arabidopsis halleri
Araha.11756s0442 1.0kb upstream 1.0kb upstream 2719 true Scaffold11756: 636306-639024 Arabidopsis halleri
Araha.11756s0442 1.0kb upstream 1.0kb upstream 1000 false Scaffold11756: 638025-639024 Arabidopsis halleri
Araha.11756s0442 1.0kb downstream 1.0kb downstream 2719 true Scaffold11756: 635306-638024 Arabidopsis halleri
Araha.11756s0442 1.0kb downstream 1.0kb downstream 1000 false Scaffold11756: 635306-636305 Arabidopsis halleri
Araha.11756s0442 2.0kb upstream 2.0kb upstream 3719 true Scaffold11756: 636306-640024 Arabidopsis halleri
Araha.11756s0442 2.0kb upstream 2.0kb upstream 2000 false Scaffold11756: 638025-640024 Arabidopsis halleri
Araha.11756s0442 2.0kb downstream 2.0kb downstream 3719 true Scaffold11756: 634306-638024 Arabidopsis halleri
Araha.11756s0442 2.0kb downstream 2.0kb downstream 2000 false Scaffold11756: 634306-636305 Arabidopsis halleri
Araha.11756s0442 5.0kb upstream 5.0kb upstream 6719 true Scaffold11756: 636306-643024 Arabidopsis halleri
Araha.11756s0442 5.0kb upstream 5.0kb upstream 5000 false Scaffold11756: 638025-643024 Arabidopsis halleri
Araha.11756s0442 5.0kb downstream 5.0kb downstream 6719 true Scaffold11756: 631306-638024 Arabidopsis halleri
Araha.11756s0442 5.0kb downstream 5.0kb downstream 5000 false Scaffold11756: 631306-636305 Arabidopsis halleri
Araha.11756s0442 10.0kb upstream 10.0kb upstream 8513 true Scaffold11756: 636306-644818 Arabidopsis halleri
Araha.11756s0442 10.0kb upstream 10.0kb upstream 6794 false Scaffold11756: 638025-644818 Arabidopsis halleri
Araha.11756s0442 10.0kb downstream 10.0kb downstream 11719 true Scaffold11756: 626306-638024 Arabidopsis halleri
Araha.11756s0442 10.0kb downstream 10.0kb downstream 10000 false Scaffold11756: 626306-636305 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367918 5261 Brassicaceae View MSA
123834383 5264 Brassicales-Malvales View MSA
124344312 5266 SBM View MSA
124238482 5268 Malvidae View MSA
124067863 5270 Rosid View MSA
123737640 5271 Pentapetalae View MSA
122793581 5272 Eudicot View MSA
122044069 5273 Angiosperm View MSA
121345199 5274 Embryophyte View MSA
123428629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain