Gene : Araha.2556s0003 A. halleri v1.1

Defline:  (1 of 2) PTHR10438:SF227 - THIOREDOXIN-LIKE 2-1, CHLOROPLASTIC-RELATED Genomic Order:  3
Name:  ? Araha.2556s0003 Secondary Identifier:  ? PAC:28839589

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2556s0003 0.5kb upstream 0.5kb upstream 2216 true Scaffold2556: 2827-5042 Arabidopsis halleri
Araha.2556s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold2556: 4543-5042 Arabidopsis halleri
Araha.2556s0003 0.5kb downstream 0.5kb downstream 2216 true Scaffold2556: 2327-4542 Arabidopsis halleri
Araha.2556s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold2556: 2327-2826 Arabidopsis halleri
Araha.2556s0003 1.0kb upstream 1.0kb upstream 2716 true Scaffold2556: 2827-5542 Arabidopsis halleri
Araha.2556s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold2556: 4543-5542 Arabidopsis halleri
Araha.2556s0003 1.0kb downstream 1.0kb downstream 2716 true Scaffold2556: 1827-4542 Arabidopsis halleri
Araha.2556s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold2556: 1827-2826 Arabidopsis halleri
Araha.2556s0003 2.0kb upstream 2.0kb upstream 3716 true Scaffold2556: 2827-6542 Arabidopsis halleri
Araha.2556s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold2556: 4543-6542 Arabidopsis halleri
Araha.2556s0003 2.0kb downstream 2.0kb downstream 3716 true Scaffold2556: 827-4542 Arabidopsis halleri
Araha.2556s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold2556: 827-2826 Arabidopsis halleri
Araha.2556s0003 5.0kb upstream 5.0kb upstream 6716 true Scaffold2556: 2827-9542 Arabidopsis halleri
Araha.2556s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold2556: 4543-9542 Arabidopsis halleri
Araha.2556s0003 5.0kb downstream 5.0kb downstream 4542 true Scaffold2556: 1-4542 Arabidopsis halleri
Araha.2556s0003 5.0kb downstream 5.0kb downstream 2826 false Scaffold2556: 1-2826 Arabidopsis halleri
Araha.2556s0003 10.0kb upstream 10.0kb upstream 8893 true Scaffold2556: 2827-11719 Arabidopsis halleri
Araha.2556s0003 10.0kb upstream 10.0kb upstream 7177 false Scaffold2556: 4543-11719 Arabidopsis halleri
Araha.2556s0003 10.0kb downstream 10.0kb downstream 4542 true Scaffold2556: 1-4542 Arabidopsis halleri
Araha.2556s0003 10.0kb downstream 10.0kb downstream 2826 false Scaffold2556: 1-2826 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372932 5261 Brassicaceae View MSA
123836866 5264 Brassicales-Malvales View MSA
124342806 5266 SBM View MSA
124246746 5268 Malvidae View MSA
124069337 5270 Rosid View MSA
123745414 5271 Pentapetalae View MSA
122792337 5272 Eudicot View MSA
122048222 5273 Angiosperm View MSA
121347781 5274 Embryophyte View MSA
123427936 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain