Gene : Araha.0396s0007 A. halleri v1.1
Defline:  (1 of 6) PTHR10621:SF5 - UBIQUITIN-LIKE PROTEIN-RELATED Genomic Order:  7
Name:  ? Araha.0396s0007 Secondary Identifier:  ? PAC:28857014
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0396s0007 0.5kb upstream 0.5kb upstream 947 true Scaffold396: 15834-16780 Arabidopsis halleri
Araha.0396s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold396: 15834-16333 Arabidopsis halleri
Araha.0396s0007 0.5kb downstream 0.5kb downstream 947 true Scaffold396: 16334-17280 Arabidopsis halleri
Araha.0396s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold396: 16781-17280 Arabidopsis halleri
Araha.0396s0007 1.0kb upstream 1.0kb upstream 1447 true Scaffold396: 15334-16780 Arabidopsis halleri
Araha.0396s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold396: 15334-16333 Arabidopsis halleri
Araha.0396s0007 1.0kb downstream 1.0kb downstream 1447 true Scaffold396: 16334-17780 Arabidopsis halleri
Araha.0396s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold396: 16781-17780 Arabidopsis halleri
Araha.0396s0007 2.0kb upstream 2.0kb upstream 2447 true Scaffold396: 14334-16780 Arabidopsis halleri
Araha.0396s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold396: 14334-16333 Arabidopsis halleri
Araha.0396s0007 2.0kb downstream 2.0kb downstream 2447 true Scaffold396: 16334-18780 Arabidopsis halleri
Araha.0396s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold396: 16781-18780 Arabidopsis halleri
Araha.0396s0007 5.0kb upstream 5.0kb upstream 5447 true Scaffold396: 11334-16780 Arabidopsis halleri
Araha.0396s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold396: 11334-16333 Arabidopsis halleri
Araha.0396s0007 5.0kb downstream 5.0kb downstream 5447 true Scaffold396: 16334-21780 Arabidopsis halleri
Araha.0396s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold396: 16781-21780 Arabidopsis halleri
Araha.0396s0007 10.0kb upstream 10.0kb upstream 10447 true Scaffold396: 6334-16780 Arabidopsis halleri
Araha.0396s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold396: 6334-16333 Arabidopsis halleri
Araha.0396s0007 10.0kb downstream 10.0kb downstream 10447 true Scaffold396: 16334-26780 Arabidopsis halleri
Araha.0396s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold396: 16781-26780 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121487180 5273 Angiosperm Singleton cluster - no MSA
122320911 5261 Brassicaceae Singleton cluster - no MSA
123762506 5264 Brassicales-Malvales Singleton cluster - no MSA
124261141 5266 SBM Singleton cluster - no MSA
124117760 5268 Malvidae Singleton cluster - no MSA
123847151 5270 Rosid Singleton cluster - no MSA
123433431 5271 Pentapetalae Singleton cluster - no MSA
122469051 5272 Eudicot Singleton cluster - no MSA
120760569 5274 Embryophyte Singleton cluster - no MSA
122803012 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain