Gene : Araha.0395s0005 A. halleri v1.1

Defline:  (1 of 3) PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN Genomic Order:  5
Name:  ? Araha.0395s0005 Secondary Identifier:  ? PAC:28859499

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.0395s0005 0.5kb upstream 0.5kb upstream 3773 true Scaffold395: 23438-27210 Arabidopsis halleri
Araha.0395s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold395: 23438-23937 Arabidopsis halleri
Araha.0395s0005 0.5kb downstream 0.5kb downstream 3773 true Scaffold395: 23938-27710 Arabidopsis halleri
Araha.0395s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold395: 27211-27710 Arabidopsis halleri
Araha.0395s0005 1.0kb upstream 1.0kb upstream 4273 true Scaffold395: 22938-27210 Arabidopsis halleri
Araha.0395s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold395: 22938-23937 Arabidopsis halleri
Araha.0395s0005 1.0kb downstream 1.0kb downstream 4273 true Scaffold395: 23938-28210 Arabidopsis halleri
Araha.0395s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold395: 27211-28210 Arabidopsis halleri
Araha.0395s0005 2.0kb upstream 2.0kb upstream 5273 true Scaffold395: 21938-27210 Arabidopsis halleri
Araha.0395s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold395: 21938-23937 Arabidopsis halleri
Araha.0395s0005 2.0kb downstream 2.0kb downstream 5273 true Scaffold395: 23938-29210 Arabidopsis halleri
Araha.0395s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold395: 27211-29210 Arabidopsis halleri
Araha.0395s0005 5.0kb upstream 5.0kb upstream 8273 true Scaffold395: 18938-27210 Arabidopsis halleri
Araha.0395s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold395: 18938-23937 Arabidopsis halleri
Araha.0395s0005 5.0kb downstream 5.0kb downstream 8273 true Scaffold395: 23938-32210 Arabidopsis halleri
Araha.0395s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold395: 27211-32210 Arabidopsis halleri
Araha.0395s0005 10.0kb upstream 10.0kb upstream 13273 true Scaffold395: 13938-27210 Arabidopsis halleri
Araha.0395s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold395: 13938-23937 Arabidopsis halleri
Araha.0395s0005 10.0kb downstream 10.0kb downstream 13273 true Scaffold395: 23938-37210 Arabidopsis halleri
Araha.0395s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold395: 27211-37210 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041408 5273 Angiosperm View MSA
122373823 5261 Brassicaceae View MSA
123836250 5264 Brassicales-Malvales View MSA
124350109 5266 SBM View MSA
124245380 5268 Malvidae View MSA
124065588 5270 Rosid View MSA
123745758 5271 Pentapetalae View MSA
122795577 5272 Eudicot View MSA
121348063 5274 Embryophyte View MSA
123428605 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain