Gene : Araha.19538s0004 A. halleri v1.1

Defline:  (1 of 2) KOG0037 - Ca2+-binding protein, EF-Hand protein superfamily Genomic Order:  4
Name:  ? Araha.19538s0004 Secondary Identifier:  ? PAC:28843087

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.19538s0004 0.5kb upstream 0.5kb upstream 1837 true Scaffold19538: 17012-18848 Arabidopsis halleri
Araha.19538s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold19538: 18349-18848 Arabidopsis halleri
Araha.19538s0004 0.5kb downstream 0.5kb downstream 1837 true Scaffold19538: 16512-18348 Arabidopsis halleri
Araha.19538s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold19538: 16512-17011 Arabidopsis halleri
Araha.19538s0004 1.0kb upstream 1.0kb upstream 2337 true Scaffold19538: 17012-19348 Arabidopsis halleri
Araha.19538s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold19538: 18349-19348 Arabidopsis halleri
Araha.19538s0004 1.0kb downstream 1.0kb downstream 2337 true Scaffold19538: 16012-18348 Arabidopsis halleri
Araha.19538s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold19538: 16012-17011 Arabidopsis halleri
Araha.19538s0004 2.0kb upstream 2.0kb upstream 3337 true Scaffold19538: 17012-20348 Arabidopsis halleri
Araha.19538s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold19538: 18349-20348 Arabidopsis halleri
Araha.19538s0004 2.0kb downstream 2.0kb downstream 3337 true Scaffold19538: 15012-18348 Arabidopsis halleri
Araha.19538s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold19538: 15012-17011 Arabidopsis halleri
Araha.19538s0004 5.0kb upstream 5.0kb upstream 5986 true Scaffold19538: 17012-22997 Arabidopsis halleri
Araha.19538s0004 5.0kb upstream 5.0kb upstream 4649 false Scaffold19538: 18349-22997 Arabidopsis halleri
Araha.19538s0004 5.0kb downstream 5.0kb downstream 6337 true Scaffold19538: 12012-18348 Arabidopsis halleri
Araha.19538s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold19538: 12012-17011 Arabidopsis halleri
Araha.19538s0004 10.0kb upstream 10.0kb upstream 5986 true Scaffold19538: 17012-22997 Arabidopsis halleri
Araha.19538s0004 10.0kb upstream 10.0kb upstream 4649 false Scaffold19538: 18349-22997 Arabidopsis halleri
Araha.19538s0004 10.0kb downstream 10.0kb downstream 11337 true Scaffold19538: 7012-18348 Arabidopsis halleri
Araha.19538s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold19538: 7012-17011 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373247 5261 Brassicaceae View MSA
123834965 5264 Brassicales-Malvales View MSA
124338994 5266 SBM View MSA
124239063 5268 Malvidae View MSA
124064338 5270 Rosid View MSA
123744145 5271 Pentapetalae View MSA
122790435 5272 Eudicot View MSA
122044402 5273 Angiosperm View MSA
121345695 5274 Embryophyte View MSA
123427497 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain