Gene : Carub.0003s1514 C. rubella v1.1

Defline:  (1 of 20) PF00560//PF13855 - Leucine Rich Repeat (LRR_1) // Leucine rich repeat (LRR_8) Genomic Order:  1514
Name:  ? Carub.0003s1514 Secondary Identifier:  ? PAC:39241810

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1514 0.5kb upstream 0.5kb upstream 4895 true scaffold_3: 5317622-5322516 Capsella rubella
Carub.0003s1514 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 5317622-5318121 Capsella rubella
Carub.0003s1514 0.5kb downstream 0.5kb downstream 4895 true scaffold_3: 5318122-5323016 Capsella rubella
Carub.0003s1514 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 5322517-5323016 Capsella rubella
Carub.0003s1514 1.0kb upstream 1.0kb upstream 5395 true scaffold_3: 5317122-5322516 Capsella rubella
Carub.0003s1514 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 5317122-5318121 Capsella rubella
Carub.0003s1514 1.0kb downstream 1.0kb downstream 5395 true scaffold_3: 5318122-5323516 Capsella rubella
Carub.0003s1514 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 5322517-5323516 Capsella rubella
Carub.0003s1514 2.0kb upstream 2.0kb upstream 6395 true scaffold_3: 5316122-5322516 Capsella rubella
Carub.0003s1514 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 5316122-5318121 Capsella rubella
Carub.0003s1514 2.0kb downstream 2.0kb downstream 6395 true scaffold_3: 5318122-5324516 Capsella rubella
Carub.0003s1514 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 5322517-5324516 Capsella rubella
Carub.0003s1514 5.0kb upstream 5.0kb upstream 9395 true scaffold_3: 5313122-5322516 Capsella rubella
Carub.0003s1514 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 5313122-5318121 Capsella rubella
Carub.0003s1514 5.0kb downstream 5.0kb downstream 9395 true scaffold_3: 5318122-5327516 Capsella rubella
Carub.0003s1514 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 5322517-5327516 Capsella rubella
Carub.0003s1514 10.0kb upstream 10.0kb upstream 14395 true scaffold_3: 5308122-5322516 Capsella rubella
Carub.0003s1514 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 5308122-5318121 Capsella rubella
Carub.0003s1514 10.0kb downstream 10.0kb downstream 14395 true scaffold_3: 5318122-5332516 Capsella rubella
Carub.0003s1514 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 5322517-5332516 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362288 5261 Brassicaceae View MSA
123834555 5264 Brassicales-Malvales View MSA
124343304 5266 SBM View MSA
124243160 5268 Malvidae View MSA
124061452 5270 Rosid View MSA
123738353 5271 Pentapetalae View MSA
122792030 5272 Eudicot View MSA
122042195 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121345842 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain