Gene : Carub.0002s1362 C. rubella v1.1

Defline:  (1 of 6) 2.1.1.112 - Glucuronoxylan 4-O-methyltransferase Genomic Order:  1362
Name:  ? Carub.0002s1362 Secondary Identifier:  ? PAC:39243815

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0002s1362 0.5kb upstream 0.5kb upstream 1376 true scaffold_2: 8506107-8507482 Capsella rubella
Carub.0002s1362 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8506107-8506606 Capsella rubella
Carub.0002s1362 0.5kb downstream 0.5kb downstream 1376 true scaffold_2: 8506607-8507982 Capsella rubella
Carub.0002s1362 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 8507483-8507982 Capsella rubella
Carub.0002s1362 1.0kb upstream 1.0kb upstream 1876 true scaffold_2: 8505607-8507482 Capsella rubella
Carub.0002s1362 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8505607-8506606 Capsella rubella
Carub.0002s1362 1.0kb downstream 1.0kb downstream 1876 true scaffold_2: 8506607-8508482 Capsella rubella
Carub.0002s1362 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 8507483-8508482 Capsella rubella
Carub.0002s1362 2.0kb upstream 2.0kb upstream 2876 true scaffold_2: 8504607-8507482 Capsella rubella
Carub.0002s1362 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8504607-8506606 Capsella rubella
Carub.0002s1362 2.0kb downstream 2.0kb downstream 2876 true scaffold_2: 8506607-8509482 Capsella rubella
Carub.0002s1362 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 8507483-8509482 Capsella rubella
Carub.0002s1362 5.0kb upstream 5.0kb upstream 5876 true scaffold_2: 8501607-8507482 Capsella rubella
Carub.0002s1362 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8501607-8506606 Capsella rubella
Carub.0002s1362 5.0kb downstream 5.0kb downstream 5876 true scaffold_2: 8506607-8512482 Capsella rubella
Carub.0002s1362 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 8507483-8512482 Capsella rubella
Carub.0002s1362 10.0kb upstream 10.0kb upstream 10876 true scaffold_2: 8496607-8507482 Capsella rubella
Carub.0002s1362 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8496607-8506606 Capsella rubella
Carub.0002s1362 10.0kb downstream 10.0kb downstream 10876 true scaffold_2: 8506607-8517482 Capsella rubella
Carub.0002s1362 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 8507483-8517482 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376292 5261 Brassicaceae View MSA
123837885 5264 Brassicales-Malvales View MSA
124337617 5266 SBM View MSA
124251086 5268 Malvidae View MSA
124074793 5270 Rosid View MSA
123750193 5271 Pentapetalae View MSA
122793595 5272 Eudicot View MSA
122042282 5273 Angiosperm View MSA
121349069 5274 Embryophyte View MSA
123381149 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain