Gene : Carub.0008s0561 C. rubella v1.1
Defline:  (1 of 2) PTHR13683//PTHR13683:SF342 - ASPARTYL PROTEASES // SUBFAMILY NOT NAMED Genomic Order:  561
Name:  ? Carub.0008s0561 Secondary Identifier:  ? PAC:39251015
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0008s0561 0.5kb upstream 0.5kb upstream 4306 true scaffold_8: 2487461-2491766 Capsella rubella
Carub.0008s0561 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 2491267-2491766 Capsella rubella
Carub.0008s0561 0.5kb downstream 0.5kb downstream 4306 true scaffold_8: 2486961-2491266 Capsella rubella
Carub.0008s0561 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 2486961-2487460 Capsella rubella
Carub.0008s0561 1.0kb upstream 1.0kb upstream 4806 true scaffold_8: 2487461-2492266 Capsella rubella
Carub.0008s0561 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 2491267-2492266 Capsella rubella
Carub.0008s0561 1.0kb downstream 1.0kb downstream 4806 true scaffold_8: 2486461-2491266 Capsella rubella
Carub.0008s0561 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 2486461-2487460 Capsella rubella
Carub.0008s0561 2.0kb upstream 2.0kb upstream 5806 true scaffold_8: 2487461-2493266 Capsella rubella
Carub.0008s0561 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 2491267-2493266 Capsella rubella
Carub.0008s0561 2.0kb downstream 2.0kb downstream 5806 true scaffold_8: 2485461-2491266 Capsella rubella
Carub.0008s0561 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 2485461-2487460 Capsella rubella
Carub.0008s0561 5.0kb upstream 5.0kb upstream 8806 true scaffold_8: 2487461-2496266 Capsella rubella
Carub.0008s0561 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 2491267-2496266 Capsella rubella
Carub.0008s0561 5.0kb downstream 5.0kb downstream 8806 true scaffold_8: 2482461-2491266 Capsella rubella
Carub.0008s0561 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 2482461-2487460 Capsella rubella
Carub.0008s0561 10.0kb upstream 10.0kb upstream 13806 true scaffold_8: 2487461-2501266 Capsella rubella
Carub.0008s0561 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 2491267-2501266 Capsella rubella
Carub.0008s0561 10.0kb downstream 10.0kb downstream 13806 true scaffold_8: 2477461-2491266 Capsella rubella
Carub.0008s0561 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 2477461-2487460 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374648 5261 Brassicaceae View MSA
123829441 5264 Brassicales-Malvales View MSA
124344304 5266 SBM View MSA
124241662 5268 Malvidae View MSA
124072520 5270 Rosid View MSA
123741714 5271 Pentapetalae View MSA
122786782 5272 Eudicot View MSA
122041856 5273 Angiosperm View MSA
121346441 5274 Embryophyte View MSA
123428674 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain