Gene : Carub.0004s0191 C. rubella v1.1
Defline:  (1 of 1) PTHR11540:SF27 - MALATE DEHYDROGENASE, GLYOXYSOMAL-RELATED Genomic Order:  191
Name:  ? Carub.0004s0191 Secondary Identifier:  ? PAC:39237339
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella GLUCONEO-PWY Capsella rubella pathologic  
Crubella GLYOXYLATE-BYPASS Capsella rubella pathologic  
Crubella PWY-5464 Capsella rubella pathologic  
Crubella PWY-561 Capsella rubella pathologic  
Crubella PWY-5690 Capsella rubella pathologic  
Crubella PWY66-399 Capsella rubella pathologic  
Crubella PWY-7115 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0004s0191 0.5kb upstream 0.5kb upstream 2938 true scaffold_4: 763407-766344 Capsella rubella
Carub.0004s0191 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 765845-766344 Capsella rubella
Carub.0004s0191 0.5kb downstream 0.5kb downstream 2938 true scaffold_4: 762907-765844 Capsella rubella
Carub.0004s0191 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 762907-763406 Capsella rubella
Carub.0004s0191 1.0kb upstream 1.0kb upstream 3438 true scaffold_4: 763407-766844 Capsella rubella
Carub.0004s0191 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 765845-766844 Capsella rubella
Carub.0004s0191 1.0kb downstream 1.0kb downstream 3438 true scaffold_4: 762407-765844 Capsella rubella
Carub.0004s0191 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 762407-763406 Capsella rubella
Carub.0004s0191 2.0kb upstream 2.0kb upstream 4438 true scaffold_4: 763407-767844 Capsella rubella
Carub.0004s0191 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 765845-767844 Capsella rubella
Carub.0004s0191 2.0kb downstream 2.0kb downstream 4438 true scaffold_4: 761407-765844 Capsella rubella
Carub.0004s0191 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 761407-763406 Capsella rubella
Carub.0004s0191 5.0kb upstream 5.0kb upstream 7438 true scaffold_4: 763407-770844 Capsella rubella
Carub.0004s0191 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 765845-770844 Capsella rubella
Carub.0004s0191 5.0kb downstream 5.0kb downstream 7438 true scaffold_4: 758407-765844 Capsella rubella
Carub.0004s0191 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 758407-763406 Capsella rubella
Carub.0004s0191 10.0kb upstream 10.0kb upstream 12438 true scaffold_4: 763407-775844 Capsella rubella
Carub.0004s0191 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 765845-775844 Capsella rubella
Carub.0004s0191 10.0kb downstream 10.0kb downstream 12438 true scaffold_4: 753407-765844 Capsella rubella
Carub.0004s0191 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 753407-763406 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369171 5261 Brassicaceae View MSA
123830380 5264 Brassicales-Malvales View MSA
124348581 5266 SBM View MSA
124236845 5268 Malvidae View MSA
124072228 5270 Rosid View MSA
123748567 5271 Pentapetalae View MSA
122789839 5272 Eudicot View MSA
122041534 5273 Angiosperm View MSA
121344614 5274 Embryophyte View MSA
123426123 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain