Gene : Carub.0001s0520 C. rubella v1.1
Defline:  (1 of 2) PTHR13683//PTHR13683:SF288 - ASPARTYL PROTEASES // ASPARTYL PROTEASE FAMILY PROTEIN-RELATED Genomic Order:  520
Name:  ? Carub.0001s0520 Secondary Identifier:  ? PAC:39231474
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s0520 0.5kb upstream 0.5kb upstream 4058 true scaffold_1: 1838191-1842248 Capsella rubella
Carub.0001s0520 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1841749-1842248 Capsella rubella
Carub.0001s0520 0.5kb downstream 0.5kb downstream 4058 true scaffold_1: 1837691-1841748 Capsella rubella
Carub.0001s0520 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1837691-1838190 Capsella rubella
Carub.0001s0520 1.0kb upstream 1.0kb upstream 4558 true scaffold_1: 1838191-1842748 Capsella rubella
Carub.0001s0520 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1841749-1842748 Capsella rubella
Carub.0001s0520 1.0kb downstream 1.0kb downstream 4558 true scaffold_1: 1837191-1841748 Capsella rubella
Carub.0001s0520 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1837191-1838190 Capsella rubella
Carub.0001s0520 2.0kb upstream 2.0kb upstream 5558 true scaffold_1: 1838191-1843748 Capsella rubella
Carub.0001s0520 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1841749-1843748 Capsella rubella
Carub.0001s0520 2.0kb downstream 2.0kb downstream 5558 true scaffold_1: 1836191-1841748 Capsella rubella
Carub.0001s0520 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1836191-1838190 Capsella rubella
Carub.0001s0520 5.0kb upstream 5.0kb upstream 8558 true scaffold_1: 1838191-1846748 Capsella rubella
Carub.0001s0520 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1841749-1846748 Capsella rubella
Carub.0001s0520 5.0kb downstream 5.0kb downstream 8558 true scaffold_1: 1833191-1841748 Capsella rubella
Carub.0001s0520 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1833191-1838190 Capsella rubella
Carub.0001s0520 10.0kb upstream 10.0kb upstream 13558 true scaffold_1: 1838191-1851748 Capsella rubella
Carub.0001s0520 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1841749-1851748 Capsella rubella
Carub.0001s0520 10.0kb downstream 10.0kb downstream 13558 true scaffold_1: 1828191-1841748 Capsella rubella
Carub.0001s0520 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1828191-1838190 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041253 5273 Angiosperm View MSA
122371767 5261 Brassicaceae View MSA
123833602 5264 Brassicales-Malvales View MSA
124344968 5266 SBM View MSA
124244545 5268 Malvidae View MSA
124069940 5270 Rosid View MSA
123745330 5271 Pentapetalae View MSA
122795136 5272 Eudicot View MSA
121309821 5274 Embryophyte View MSA
123347473 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain