Gene : Carub.0001s3096 C. rubella v1.1
Defline:  (1 of 1) PTHR19370:SF109 - FERREDOXIN C2 Genomic Order:  3096
Name:  ? Carub.0001s3096 Secondary Identifier:  ? PAC:39228481
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3096 0.5kb upstream 0.5kb upstream 2785 true scaffold_1: 11456937-11459721 Capsella rubella
Carub.0001s3096 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11459222-11459721 Capsella rubella
Carub.0001s3096 0.5kb downstream 0.5kb downstream 2785 true scaffold_1: 11456437-11459221 Capsella rubella
Carub.0001s3096 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11456437-11456936 Capsella rubella
Carub.0001s3096 1.0kb upstream 1.0kb upstream 3285 true scaffold_1: 11456937-11460221 Capsella rubella
Carub.0001s3096 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11459222-11460221 Capsella rubella
Carub.0001s3096 1.0kb downstream 1.0kb downstream 3285 true scaffold_1: 11455937-11459221 Capsella rubella
Carub.0001s3096 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11455937-11456936 Capsella rubella
Carub.0001s3096 2.0kb upstream 2.0kb upstream 4285 true scaffold_1: 11456937-11461221 Capsella rubella
Carub.0001s3096 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11459222-11461221 Capsella rubella
Carub.0001s3096 2.0kb downstream 2.0kb downstream 4285 true scaffold_1: 11454937-11459221 Capsella rubella
Carub.0001s3096 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11454937-11456936 Capsella rubella
Carub.0001s3096 5.0kb upstream 5.0kb upstream 7285 true scaffold_1: 11456937-11464221 Capsella rubella
Carub.0001s3096 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11459222-11464221 Capsella rubella
Carub.0001s3096 5.0kb downstream 5.0kb downstream 7285 true scaffold_1: 11451937-11459221 Capsella rubella
Carub.0001s3096 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11451937-11456936 Capsella rubella
Carub.0001s3096 10.0kb upstream 10.0kb upstream 12285 true scaffold_1: 11456937-11469221 Capsella rubella
Carub.0001s3096 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11459222-11469221 Capsella rubella
Carub.0001s3096 10.0kb downstream 10.0kb downstream 12285 true scaffold_1: 11446937-11459221 Capsella rubella
Carub.0001s3096 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11446937-11456936 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378480 5261 Brassicaceae View MSA
123839298 5264 Brassicales-Malvales View MSA
124342507 5266 SBM View MSA
124238823 5268 Malvidae View MSA
124062702 5270 Rosid View MSA
123739911 5271 Pentapetalae View MSA
122791268 5272 Eudicot View MSA
122047270 5273 Angiosperm View MSA
123429005 5275 Viridiplantae View MSA
121344610 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain