Protein : Carub.0001s3933.1.p C. rubella v1.1
UniProt Accession:  ? R0I8X9 Secondary Identifier:  PAC:39229942
Organism Name:  Capsella rubella Length:  1003  
Name:  Carub.0001s3933.1.p
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Proteins

9 Protein Domains

DB identifier Type Name
IPR002318 Family Alanine-tRNA ligase, class IIc
IPR003156 Domain DHHA1 domain
IPR018162 Domain Alanine-tRNA ligase, class IIc, anti-codon-binding domain
IPR009000 Domain Translation protein, beta-barrel domain
IPR012947 Domain Threonyl/alanyl tRNA synthetase, SAD
IPR018163 Domain Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain
IPR023218 Domain UPF0291 structural domain
IPR018165 Domain Alanyl-tRNA synthetase, class IIc, core domain
IPR018164 Domain Alanyl-tRNA synthetase, class IIc, N-terminal
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Carub.0001s3933.1_CDS 3012   scaffold_1: 17328297-17335225 Capsella rubella

39 Ontology Annotations

Ontology Term Db Gene/Protein Name
6.1.1.7 ENZYME Carub.0001s3933.1.p
GO:0003676 GO Carub.0001s3933.1.p
GO:0000166 GO Carub.0001s3933.1.p
GO:0005524 GO Carub.0001s3933.1.p
GO:0004813 GO Carub.0001s3933.1.p
G3DSA:3.30.70.260 GENE3D Carub.0001s3933.1.p
G3DSA:1.10.287.540 GENE3D Carub.0001s3933.1.p
G3DSA:3.30.980.10 GENE3D Carub.0001s3933.1.p
G3DSA:3.30.930.10 GENE3D Carub.0001s3933.1.p
IPR002318 InterPro Carub.0001s3933.1.p
IPR003156 InterPro Carub.0001s3933.1.p
GO:0006419 GO Carub.0001s3933.1.p
GO:0005737 GO Carub.0001s3933.1.p
GO:0043039 GO Carub.0001s3933.1.p
GO:0016876 GO Carub.0001s3933.1.p
IPR018163 InterPro Carub.0001s3933.1.p
IPR018164 InterPro Carub.0001s3933.1.p
IPR012947 InterPro Carub.0001s3933.1.p
IPR009000 InterPro Carub.0001s3933.1.p
IPR018162 InterPro Carub.0001s3933.1.p
PTHR11777 PANTHER Carub.0001s3933.1.p
ALANINE--TRNA-LIGASE-RXN MetaCyc Carub.0001s3933.1.p
TRNA-CHARGING-PWY Pathway Carub.0001s3933.1.p
PTHR11777:SF18 PANTHER Carub.0001s3933.1.p
IPR018165 InterPro Carub.0001s3933.1.p
K01872 KEGG Carub.0001s3933.1.p
IPR023218 InterPro Carub.0001s3933.1.p
SM00863 SMART Carub.0001s3933.1.p
PS50860 PROFILE Carub.0001s3933.1.p
SSF50447 SSF Carub.0001s3933.1.p

1 Pathway Components

Type Key Level Step
      84

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella TRNA-CHARGING-PWY Capsella rubella pathologic