Gene : Carub.0005s3011 C. rubella v1.1
Defline:  (1 of 1) PTHR21736//PTHR21736:SF23 - VERNALIZATION-INSENSITIVE PROTEIN 3 // PROTEIN OBERON 4 Genomic Order:  3011
Name:  ? Carub.0005s3011 Secondary Identifier:  ? PAC:39224659
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s3011 0.5kb upstream 0.5kb upstream 4833 true scaffold_5: 13701722-13706554 Capsella rubella
Carub.0005s3011 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 13706055-13706554 Capsella rubella
Carub.0005s3011 0.5kb downstream 0.5kb downstream 4833 true scaffold_5: 13701222-13706054 Capsella rubella
Carub.0005s3011 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 13701222-13701721 Capsella rubella
Carub.0005s3011 1.0kb upstream 1.0kb upstream 5333 true scaffold_5: 13701722-13707054 Capsella rubella
Carub.0005s3011 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 13706055-13707054 Capsella rubella
Carub.0005s3011 1.0kb downstream 1.0kb downstream 5333 true scaffold_5: 13700722-13706054 Capsella rubella
Carub.0005s3011 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 13700722-13701721 Capsella rubella
Carub.0005s3011 2.0kb upstream 2.0kb upstream 6333 true scaffold_5: 13701722-13708054 Capsella rubella
Carub.0005s3011 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 13706055-13708054 Capsella rubella
Carub.0005s3011 2.0kb downstream 2.0kb downstream 6333 true scaffold_5: 13699722-13706054 Capsella rubella
Carub.0005s3011 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 13699722-13701721 Capsella rubella
Carub.0005s3011 5.0kb upstream 5.0kb upstream 9333 true scaffold_5: 13701722-13711054 Capsella rubella
Carub.0005s3011 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 13706055-13711054 Capsella rubella
Carub.0005s3011 5.0kb downstream 5.0kb downstream 9333 true scaffold_5: 13696722-13706054 Capsella rubella
Carub.0005s3011 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 13696722-13701721 Capsella rubella
Carub.0005s3011 10.0kb upstream 10.0kb upstream 14333 true scaffold_5: 13701722-13716054 Capsella rubella
Carub.0005s3011 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 13706055-13716054 Capsella rubella
Carub.0005s3011 10.0kb downstream 10.0kb downstream 14333 true scaffold_5: 13691722-13706054 Capsella rubella
Carub.0005s3011 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 13691722-13701721 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360826 5261 Brassicaceae View MSA
123832012 5264 Brassicales-Malvales View MSA
124348781 5266 SBM View MSA
124242145 5268 Malvidae View MSA
124068909 5270 Rosid View MSA
123740633 5271 Pentapetalae View MSA
122788431 5272 Eudicot View MSA
122042816 5273 Angiosperm View MSA
121350320 5274 Embryophyte View MSA
123381677 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain