Gene : Carub.0001s2299 C. rubella v1.1
Defline:  (1 of 3) K02977 - small subunit ribosomal protein S27Ae (RP-S27Ae, RPS27A) Genomic Order:  2299
Name:  ? Carub.0001s2299 Secondary Identifier:  ? PAC:39227810
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2299 0.5kb upstream 0.5kb upstream 1124 true scaffold_1: 8292122-8293245 Capsella rubella
Carub.0001s2299 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8292122-8292621 Capsella rubella
Carub.0001s2299 0.5kb downstream 0.5kb downstream 1124 true scaffold_1: 8292622-8293745 Capsella rubella
Carub.0001s2299 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8293246-8293745 Capsella rubella
Carub.0001s2299 1.0kb upstream 1.0kb upstream 1624 true scaffold_1: 8291622-8293245 Capsella rubella
Carub.0001s2299 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8291622-8292621 Capsella rubella
Carub.0001s2299 1.0kb downstream 1.0kb downstream 1624 true scaffold_1: 8292622-8294245 Capsella rubella
Carub.0001s2299 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8293246-8294245 Capsella rubella
Carub.0001s2299 2.0kb upstream 2.0kb upstream 2624 true scaffold_1: 8290622-8293245 Capsella rubella
Carub.0001s2299 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8290622-8292621 Capsella rubella
Carub.0001s2299 2.0kb downstream 2.0kb downstream 2624 true scaffold_1: 8292622-8295245 Capsella rubella
Carub.0001s2299 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8293246-8295245 Capsella rubella
Carub.0001s2299 5.0kb upstream 5.0kb upstream 5624 true scaffold_1: 8287622-8293245 Capsella rubella
Carub.0001s2299 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8287622-8292621 Capsella rubella
Carub.0001s2299 5.0kb downstream 5.0kb downstream 5624 true scaffold_1: 8292622-8298245 Capsella rubella
Carub.0001s2299 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8293246-8298245 Capsella rubella
Carub.0001s2299 10.0kb upstream 10.0kb upstream 10624 true scaffold_1: 8282622-8293245 Capsella rubella
Carub.0001s2299 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8282622-8292621 Capsella rubella
Carub.0001s2299 10.0kb downstream 10.0kb downstream 10624 true scaffold_1: 8292622-8303245 Capsella rubella
Carub.0001s2299 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8293246-8303245 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365617 5261 Brassicaceae View MSA
123798998 5264 Brassicales-Malvales View MSA
124296566 5266 SBM View MSA
124148679 5268 Malvidae View MSA
123874630 5270 Rosid View MSA
123736823 5271 Pentapetalae View MSA
122788692 5272 Eudicot View MSA
122045257 5273 Angiosperm View MSA
121350332 5274 Embryophyte View MSA
123424740 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain