Gene : Carub.0001s4016 C. rubella v1.1
Defline:  (1 of 1) PTHR10983//PTHR10983:SF26 - 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED // 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 3 Genomic Order:  4016
Name:  ? Carub.0001s4016 Secondary Identifier:  ? PAC:39227525
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY0-1319 Capsella rubella pathologic  
Crubella PWY4FS-7 Capsella rubella pathologic  
Crubella PWY-7411 Capsella rubella pathologic  
Crubella PWY-7417 Capsella rubella pathologic  
Crubella TRIGLSYN-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s4016 0.5kb upstream 0.5kb upstream 2764 true scaffold_1: 17755075-17757838 Capsella rubella
Carub.0001s4016 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 17757339-17757838 Capsella rubella
Carub.0001s4016 0.5kb downstream 0.5kb downstream 2764 true scaffold_1: 17754575-17757338 Capsella rubella
Carub.0001s4016 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 17754575-17755074 Capsella rubella
Carub.0001s4016 1.0kb upstream 1.0kb upstream 3264 true scaffold_1: 17755075-17758338 Capsella rubella
Carub.0001s4016 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 17757339-17758338 Capsella rubella
Carub.0001s4016 1.0kb downstream 1.0kb downstream 3264 true scaffold_1: 17754075-17757338 Capsella rubella
Carub.0001s4016 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 17754075-17755074 Capsella rubella
Carub.0001s4016 2.0kb upstream 2.0kb upstream 4264 true scaffold_1: 17755075-17759338 Capsella rubella
Carub.0001s4016 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 17757339-17759338 Capsella rubella
Carub.0001s4016 2.0kb downstream 2.0kb downstream 4264 true scaffold_1: 17753075-17757338 Capsella rubella
Carub.0001s4016 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 17753075-17755074 Capsella rubella
Carub.0001s4016 5.0kb upstream 5.0kb upstream 7264 true scaffold_1: 17755075-17762338 Capsella rubella
Carub.0001s4016 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 17757339-17762338 Capsella rubella
Carub.0001s4016 5.0kb downstream 5.0kb downstream 7264 true scaffold_1: 17750075-17757338 Capsella rubella
Carub.0001s4016 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 17750075-17755074 Capsella rubella
Carub.0001s4016 10.0kb upstream 10.0kb upstream 12264 true scaffold_1: 17755075-17767338 Capsella rubella
Carub.0001s4016 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 17757339-17767338 Capsella rubella
Carub.0001s4016 10.0kb downstream 10.0kb downstream 12264 true scaffold_1: 17745075-17757338 Capsella rubella
Carub.0001s4016 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 17745075-17755074 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028069 5273 Angiosperm View MSA
122373400 5261 Brassicaceae View MSA
123833102 5264 Brassicales-Malvales View MSA
124341197 5266 SBM View MSA
124244729 5268 Malvidae View MSA
124037222 5270 Rosid View MSA
123753579 5271 Pentapetalae View MSA
122775158 5272 Eudicot View MSA
121297614 5274 Embryophyte View MSA
123335652 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain