Gene : Carub.0001s4346 C. rubella v1.1
Defline:  (1 of 10) PTHR10052 - 60S RIBOSOMAL PROTEIN L18A Genomic Order:  4346
Name:  ? Carub.0001s4346 Secondary Identifier:  ? PAC:39229135
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s4346 0.5kb upstream 0.5kb upstream 2127 true scaffold_1: 19063883-19066009 Capsella rubella
Carub.0001s4346 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 19065510-19066009 Capsella rubella
Carub.0001s4346 0.5kb downstream 0.5kb downstream 2127 true scaffold_1: 19063383-19065509 Capsella rubella
Carub.0001s4346 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 19063383-19063882 Capsella rubella
Carub.0001s4346 1.0kb upstream 1.0kb upstream 2627 true scaffold_1: 19063883-19066509 Capsella rubella
Carub.0001s4346 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 19065510-19066509 Capsella rubella
Carub.0001s4346 1.0kb downstream 1.0kb downstream 2627 true scaffold_1: 19062883-19065509 Capsella rubella
Carub.0001s4346 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 19062883-19063882 Capsella rubella
Carub.0001s4346 2.0kb upstream 2.0kb upstream 3627 true scaffold_1: 19063883-19067509 Capsella rubella
Carub.0001s4346 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 19065510-19067509 Capsella rubella
Carub.0001s4346 2.0kb downstream 2.0kb downstream 3627 true scaffold_1: 19061883-19065509 Capsella rubella
Carub.0001s4346 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 19061883-19063882 Capsella rubella
Carub.0001s4346 5.0kb upstream 5.0kb upstream 6627 true scaffold_1: 19063883-19070509 Capsella rubella
Carub.0001s4346 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 19065510-19070509 Capsella rubella
Carub.0001s4346 5.0kb downstream 5.0kb downstream 6627 true scaffold_1: 19058883-19065509 Capsella rubella
Carub.0001s4346 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 19058883-19063882 Capsella rubella
Carub.0001s4346 10.0kb upstream 10.0kb upstream 11627 true scaffold_1: 19063883-19075509 Capsella rubella
Carub.0001s4346 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 19065510-19075509 Capsella rubella
Carub.0001s4346 10.0kb downstream 10.0kb downstream 11627 true scaffold_1: 19053883-19065509 Capsella rubella
Carub.0001s4346 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 19053883-19063882 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027441 5273 Angiosperm View MSA
122335131 5261 Brassicaceae Singleton cluster - no MSA
123841516 5264 Brassicales-Malvales View MSA
124348801 5266 SBM View MSA
124247550 5268 Malvidae View MSA
124063459 5270 Rosid View MSA
123745455 5271 Pentapetalae View MSA
122796236 5272 Eudicot View MSA
121350597 5274 Embryophyte View MSA
123425775 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain