Gene : Carub.0001s4090 C. rubella v1.1
Defline:  (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  4090
Name:  ? Carub.0001s4090 Secondary Identifier:  ? PAC:39227536
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s4090 0.5kb upstream 0.5kb upstream 2931 true scaffold_1: 18052527-18055457 Capsella rubella
Carub.0001s4090 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 18054958-18055457 Capsella rubella
Carub.0001s4090 0.5kb downstream 0.5kb downstream 2931 true scaffold_1: 18052027-18054957 Capsella rubella
Carub.0001s4090 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 18052027-18052526 Capsella rubella
Carub.0001s4090 1.0kb upstream 1.0kb upstream 3431 true scaffold_1: 18052527-18055957 Capsella rubella
Carub.0001s4090 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 18054958-18055957 Capsella rubella
Carub.0001s4090 1.0kb downstream 1.0kb downstream 3431 true scaffold_1: 18051527-18054957 Capsella rubella
Carub.0001s4090 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 18051527-18052526 Capsella rubella
Carub.0001s4090 2.0kb upstream 2.0kb upstream 4431 true scaffold_1: 18052527-18056957 Capsella rubella
Carub.0001s4090 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 18054958-18056957 Capsella rubella
Carub.0001s4090 2.0kb downstream 2.0kb downstream 4431 true scaffold_1: 18050527-18054957 Capsella rubella
Carub.0001s4090 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 18050527-18052526 Capsella rubella
Carub.0001s4090 5.0kb upstream 5.0kb upstream 7431 true scaffold_1: 18052527-18059957 Capsella rubella
Carub.0001s4090 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 18054958-18059957 Capsella rubella
Carub.0001s4090 5.0kb downstream 5.0kb downstream 7431 true scaffold_1: 18047527-18054957 Capsella rubella
Carub.0001s4090 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 18047527-18052526 Capsella rubella
Carub.0001s4090 10.0kb upstream 10.0kb upstream 12431 true scaffold_1: 18052527-18064957 Capsella rubella
Carub.0001s4090 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 18054958-18064957 Capsella rubella
Carub.0001s4090 10.0kb downstream 10.0kb downstream 12431 true scaffold_1: 18042527-18054957 Capsella rubella
Carub.0001s4090 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 18042527-18052526 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361660 5261 Brassicaceae View MSA
123831117 5264 Brassicales-Malvales View MSA
124341027 5266 SBM View MSA
124242407 5268 Malvidae View MSA
124060540 5270 Rosid View MSA
123739783 5271 Pentapetalae View MSA
122791645 5272 Eudicot View MSA
122041926 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain