Gene : Carub.0005s1354 C. rubella v1.1
Defline:  (1 of 1) K13427 - nitric-oxide synthase, plant (NOA1) Genomic Order:  1354
Name:  ? Carub.0005s1354 Secondary Identifier:  ? PAC:39225721
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6845 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s1354 0.5kb upstream 0.5kb upstream 3644 true scaffold_5: 7530516-7534159 Capsella rubella
Carub.0005s1354 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 7533660-7534159 Capsella rubella
Carub.0005s1354 0.5kb downstream 0.5kb downstream 3644 true scaffold_5: 7530016-7533659 Capsella rubella
Carub.0005s1354 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 7530016-7530515 Capsella rubella
Carub.0005s1354 1.0kb upstream 1.0kb upstream 4144 true scaffold_5: 7530516-7534659 Capsella rubella
Carub.0005s1354 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 7533660-7534659 Capsella rubella
Carub.0005s1354 1.0kb downstream 1.0kb downstream 4144 true scaffold_5: 7529516-7533659 Capsella rubella
Carub.0005s1354 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 7529516-7530515 Capsella rubella
Carub.0005s1354 2.0kb upstream 2.0kb upstream 5144 true scaffold_5: 7530516-7535659 Capsella rubella
Carub.0005s1354 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 7533660-7535659 Capsella rubella
Carub.0005s1354 2.0kb downstream 2.0kb downstream 5144 true scaffold_5: 7528516-7533659 Capsella rubella
Carub.0005s1354 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 7528516-7530515 Capsella rubella
Carub.0005s1354 5.0kb upstream 5.0kb upstream 8144 true scaffold_5: 7530516-7538659 Capsella rubella
Carub.0005s1354 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 7533660-7538659 Capsella rubella
Carub.0005s1354 5.0kb downstream 5.0kb downstream 8144 true scaffold_5: 7525516-7533659 Capsella rubella
Carub.0005s1354 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 7525516-7530515 Capsella rubella
Carub.0005s1354 10.0kb upstream 10.0kb upstream 13144 true scaffold_5: 7530516-7543659 Capsella rubella
Carub.0005s1354 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 7533660-7543659 Capsella rubella
Carub.0005s1354 10.0kb downstream 10.0kb downstream 13144 true scaffold_5: 7520516-7533659 Capsella rubella
Carub.0005s1354 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 7520516-7530515 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374132 5261 Brassicaceae View MSA
123833305 5264 Brassicales-Malvales View MSA
124342471 5266 SBM View MSA
124243451 5268 Malvidae View MSA
124065366 5270 Rosid View MSA
123739170 5271 Pentapetalae View MSA
122792557 5272 Eudicot View MSA
122045244 5273 Angiosperm View MSA
121346425 5274 Embryophyte View MSA
123426230 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain