Gene : Carub.0005s0553 C. rubella v1.1
Defline:  (1 of 6) PTHR22950:SF235 - LYSINE HISTIDINE TRANSPORTER 1-RELATED Genomic Order:  553
Name:  ? Carub.0005s0553 Secondary Identifier:  ? PAC:39224849
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s0553 0.5kb upstream 0.5kb upstream 3283 true scaffold_5: 2230906-2234188 Capsella rubella
Carub.0005s0553 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 2233689-2234188 Capsella rubella
Carub.0005s0553 0.5kb downstream 0.5kb downstream 3283 true scaffold_5: 2230406-2233688 Capsella rubella
Carub.0005s0553 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 2230406-2230905 Capsella rubella
Carub.0005s0553 1.0kb upstream 1.0kb upstream 3783 true scaffold_5: 2230906-2234688 Capsella rubella
Carub.0005s0553 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 2233689-2234688 Capsella rubella
Carub.0005s0553 1.0kb downstream 1.0kb downstream 3783 true scaffold_5: 2229906-2233688 Capsella rubella
Carub.0005s0553 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 2229906-2230905 Capsella rubella
Carub.0005s0553 2.0kb upstream 2.0kb upstream 4783 true scaffold_5: 2230906-2235688 Capsella rubella
Carub.0005s0553 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 2233689-2235688 Capsella rubella
Carub.0005s0553 2.0kb downstream 2.0kb downstream 4783 true scaffold_5: 2228906-2233688 Capsella rubella
Carub.0005s0553 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 2228906-2230905 Capsella rubella
Carub.0005s0553 5.0kb upstream 5.0kb upstream 7783 true scaffold_5: 2230906-2238688 Capsella rubella
Carub.0005s0553 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 2233689-2238688 Capsella rubella
Carub.0005s0553 5.0kb downstream 5.0kb downstream 7783 true scaffold_5: 2225906-2233688 Capsella rubella
Carub.0005s0553 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 2225906-2230905 Capsella rubella
Carub.0005s0553 10.0kb upstream 10.0kb upstream 12783 true scaffold_5: 2230906-2243688 Capsella rubella
Carub.0005s0553 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 2233689-2243688 Capsella rubella
Carub.0005s0553 10.0kb downstream 10.0kb downstream 12783 true scaffold_5: 2220906-2233688 Capsella rubella
Carub.0005s0553 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 2220906-2230905 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380047 5261 Brassicaceae View MSA
123841690 5264 Brassicales-Malvales View MSA
124338955 5266 SBM View MSA
124238862 5268 Malvidae View MSA
124066006 5270 Rosid View MSA
123750128 5271 Pentapetalae View MSA
122791179 5272 Eudicot View MSA
122045993 5273 Angiosperm View MSA
121346963 5274 Embryophyte View MSA
123428146 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain