Protein Family : Coatomer, beta' subunit 124346032

Method ID:  5266 Method Name:  SBM
Sequence Alignment:  View MSA Member Count:  24

24 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
orange1.1g002496m.g (1 of 1) PTHR19876:SF6 - COATOMER SUBUNIT BETA'-1 C. sinensis v1.1 10014   scaffold00258: 183047-193060
AT3G15980 (1 of 3) K17302 - coatomer, subunit beta' (COPB2, SEC27) A. thaliana TAIR10 7250   Chr3: 5411292-5418541
AT1G52360 (1 of 3) K17302 - coatomer, subunit beta' (COPB2, SEC27) A. thaliana TAIR10 7009   Chr1: 19499162-19506170
Thhalv10020009m.g (1 of 2) PTHR19876:SF6 - COATOMER SUBUNIT BETA'-1 E. salsugineum v1.0 7162   scaffold_13: 3944092-3951253
Thhalv10011217m.g (1 of 2) PTHR19876:SF6 - COATOMER SUBUNIT BETA'-1 E. salsugineum v1.0 7186   scaffold_7: 1651917-1659102
Ciclev10027174m.g (1 of 1) PTHR19876:SF6 - COATOMER SUBUNIT BETA'-1 C. clementina v1.0 9323   scaffold_7: 9452114-9461436
Gorai.009G132800 (1 of 4) PTHR19876:SF6 - COATOMER SUBUNIT BETA'-1 G. raimondii v2.1 10824   Chr09: 9979947-9990770
Gorai.006G099000 (1 of 4) PTHR19876:SF6 - COATOMER SUBUNIT BETA'-1 G. raimondii v2.1 9833   Chr06: 33929656-33939488
Thecc1EG028674 (1 of 3) K17302 - coatomer, subunit beta' (COPB2, SEC27) T. cacao v1.1 40545   scaffold_6: 17401316-17441860
Araha.19812s0003 (1 of 4) PTHR19876:SF6 - COATOMER SUBUNIT BETA'-1 A. halleri v1.1 6878   Scaffold19812: 6922-13799
Araha.11433s0002 (1 of 4) PTHR19876:SF6 - COATOMER SUBUNIT BETA'-1 A. halleri v1.1 7162   Scaffold11433: 14291-21452
Araha.16937s0003 (1 of 4) PTHR19876:SF6 - COATOMER SUBUNIT BETA'-1 A. halleri v1.1 6575   Scaffold16937: 9111-15685
Cagra.1725s0140 (1 of 3) PTHR19876:SF6 - COATOMER SUBUNIT BETA'-1 C. grandiflora v1.1 6220   Scaffold1725: 508848-515067
Cagra.3651s0008 (1 of 3) PTHR19876:SF6 - COATOMER SUBUNIT BETA'-1 C. grandiflora v1.1 6927   Scaffold3651: 30797-37723
Cagra.4205s0001 (1 of 3) PTHR19876:SF6 - COATOMER SUBUNIT BETA'-1 C. grandiflora v1.1 7113   Scaffold4205: 3317-10429
Brara.A03091 (1 of 6) PTHR19876:SF6 - COATOMER SUBUNIT BETA'-1 B. rapa FPsc v1.3 6606   A01: 26147280-26153885
Brara.E01583 (1 of 6) PTHR19876:SF6 - COATOMER SUBUNIT BETA'-1 B. rapa FPsc v1.3 6655   A05: 10523497-10530151
Bostr.20129s0516 (1 of 1) PF00400//PF04053 - WD domain, G-beta repeat (WD40) // Coatomer WD associated region (Coatomer_WDAD) B. stricta v1.2 6569   Scaffold20129: 2730680-2737248
AL1G60610 (1 of 3) K17302 - coatomer, subunit beta' (COPB2, SEC27) A. lyrata v2.1 6925   scaffold_1: 27900099-27907023
AL2G41550 (1 of 3) K17302 - coatomer, subunit beta' (COPB2, SEC27) A. lyrata v2.1 6445   scaffold_2: 19211605-19218049
AL3G28630 (1 of 3) K17302 - coatomer, subunit beta' (COPB2, SEC27) A. lyrata v2.1 7177   scaffold_3: 6704380-6711556
Carub.0001s4136 (1 of 3) K17302 - coatomer, subunit beta' (COPB2, SEC27) C. rubella v1.1 7006   scaffold_1: 18256269-18263274
Carub.0002s2752 (1 of 3) K17302 - coatomer, subunit beta' (COPB2, SEC27) C. rubella v1.1 6200   scaffold_2: 14017322-14023521
Carub.0003s1571 (1 of 3) K17302 - coatomer, subunit beta' (COPB2, SEC27) C. rubella v1.1 6604   scaffold_3: 5539293-5545896

24 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g002496m C. sinensis v1.1 124346032 Coatomer, beta' subunit 1 5266 SBM
Thhalv10011217m E. salsugineum v1.0 124346032 Coatomer, beta' subunit 2 5266 SBM
Araha.11433s0002.1.p A. halleri v1.1 124346032 Coatomer, beta' subunit 3 5266 SBM
Araha.19812s0003.1.p A. halleri v1.1 124346032 Coatomer, beta' subunit 3 5266 SBM
Araha.16937s0003.1.p A. halleri v1.1 124346032 Coatomer, beta' subunit 3 5266 SBM
Brara.E01583.1.p B. rapa FPsc v1.3 124346032 Coatomer, beta' subunit 2 5266 SBM
Carub.0003s1571.1.p C. rubella v1.1 124346032 Coatomer, beta' subunit 3 5266 SBM
Carub.0002s2752.1.p C. rubella v1.1 124346032 Coatomer, beta' subunit 3 5266 SBM
AT1G52360.2 A. thaliana TAIR10 124346032 Coatomer, beta' subunit 2 5266 SBM
AT3G15980.5 A. thaliana TAIR10 124346032 Coatomer, beta' subunit 2 5266 SBM
Thhalv10020009m E. salsugineum v1.0 124346032 Coatomer, beta' subunit 2 5266 SBM
Ciclev10027174m C. clementina v1.0 124346032 Coatomer, beta' subunit 1 5266 SBM
Gorai.009G132800.1 G. raimondii v2.1 124346032 Coatomer, beta' subunit 2 5266 SBM
Gorai.006G099000.1 G. raimondii v2.1 124346032 Coatomer, beta' subunit 2 5266 SBM
Thecc1EG028674t1 T. cacao v1.1 124346032 Coatomer, beta' subunit 1 5266 SBM
Cagra.1725s0140.1.p C. grandiflora v1.1 124346032 Coatomer, beta' subunit 3 5266 SBM
Cagra.3651s0008.1.p C. grandiflora v1.1 124346032 Coatomer, beta' subunit 3 5266 SBM
Cagra.4205s0001.1.p C. grandiflora v1.1 124346032 Coatomer, beta' subunit 3 5266 SBM
Brara.A03091.1.p B. rapa FPsc v1.3 124346032 Coatomer, beta' subunit 2 5266 SBM
Bostr.20129s0516.1.p B. stricta v1.2 124346032 Coatomer, beta' subunit 1 5266 SBM
AL3G28630.t1 A. lyrata v2.1 124346032 Coatomer, beta' subunit 3 5266 SBM
AL1G60610.t1 A. lyrata v2.1 124346032 Coatomer, beta' subunit 3 5266 SBM
AL2G41550.t1 A. lyrata v2.1 124346032 Coatomer, beta' subunit 3 5266 SBM
Carub.0001s4136.1.p C. rubella v1.1 124346032 Coatomer, beta' subunit 3 5266 SBM