Protein Family : LSD1 zinc finger family protein 124253949

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  25

25 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
orange1.1g026941m.g (1 of 1) PTHR31747:SF3 - PROTEIN LSD1 C. sinensis v1.1 4372   scaffold00008: 2261562-2265933
AT4G20380 (1 of 1) PTHR31747:SF3 - PROTEIN LSD1 A. thaliana TAIR10 LSD1 2272   Chr4: 11004517-11006788
Thhalv10001047m.g (1 of 2) PTHR31747:SF3 - PROTEIN LSD1 E. salsugineum v1.0 1730   scaffold_20: 119758-121487
Ciclev10016959m.g (1 of 1) PTHR31747:SF3 - PROTEIN LSD1 C. clementina v1.0 6195   scaffold_2: 30886469-30892663
Lus10008066.g (1 of 4) PTHR31747:SF3 - PROTEIN LSD1 L. usitatissimum v1.0 2236   scaffold374: 98312-100547
Gorai.009G116000 (1 of 3) PTHR31747:SF3 - PROTEIN LSD1 G. raimondii v2.1 7140   Chr09: 8515411-8522550
Gorai.010G246900 (1 of 3) PTHR31747:SF3 - PROTEIN LSD1 G. raimondii v2.1 4333   Chr10: 61549612-61553944
Gorai.011G005300 (1 of 3) PTHR31747:SF3 - PROTEIN LSD1 G. raimondii v2.1 4633   Chr11: 430756-435388
Thecc1EG026947 (1 of 1) PTHR31747:SF3 - PROTEIN LSD1 T. cacao v1.1 6545   scaffold_6: 446207-452751
Araha.5387s0004 (1 of 1) PTHR31747:SF3 - PROTEIN LSD1 A. halleri v1.1 2224   Scaffold5387: 9674-11897
Cagra.4169s0009 (1 of 1) PTHR31747:SF3 - PROTEIN LSD1 C. grandiflora v1.1 2358   Scaffold4169: 32188-34545
Brara.A01111 (1 of 3) PTHR31747:SF3 - PROTEIN LSD1 B. rapa FPsc v1.3 1929   A01: 5940376-5942304
Brara.H01037 (1 of 3) PTHR31747:SF3 - PROTEIN LSD1 B. rapa FPsc v1.3 1408   A08: 12247005-12248412
Brara.K01803 (1 of 3) PTHR31747:SF3 - PROTEIN LSD1 B. rapa FPsc v1.3 987   Scaffold87669: 500403-501389
Bostr.10689s0017 (1 of 1) PTHR31747:SF3 - PROTEIN LSD1 B. stricta v1.2 2357   Scaffold10689: 139956-142312
SapurV1A.0131s0170 (1 of 3) PTHR31747:SF3 - PROTEIN LSD1 S. purpurea v1.0 4510   chr11: 16662227-16666736
SapurV1A.0385s0090 (1 of 3) PTHR31747:SF3 - PROTEIN LSD1 S. purpurea v1.0 4460   Scaffold0385: 162803-167262
Manes.03G069700 (1 of 2) PTHR31747:SF3 - PROTEIN LSD1 M. esculenta v6.1 16633   Chromosome03: 8457815-8474447
Manes.16G062400 (1 of 2) PTHR31747:SF3 - PROTEIN LSD1 M. esculenta v6.1 10310   Chromosome16: 19958062-19968371
AL7G33510 (1 of 2) PTHR31747:SF3 - PROTEIN LSD1 A. lyrata v2.1 2452   scaffold_7: 9663911-9666362
Potri.001G442400 (1 of 2) PTHR31747:SF3 - PROTEIN LSD1 P. trichocarpa v3.1 4936   Chr01: 47356967-47361902
Potri.011G154800 (1 of 2) PTHR31747:SF3 - PROTEIN LSD1 P. trichocarpa v3.1 4731   Chr11: 17327680-17332410
Podel.01G462900 (1 of 2) PTHR31747:SF3 - PROTEIN LSD1 P. deltoides WV94 v2.1 4632   Chr01: 49961900-49966531
Podel.11G151700 (1 of 2) PTHR31747:SF3 - PROTEIN LSD1 P. deltoides WV94 v2.1 4643   Chr11: 17244293-17248935
Carub.0007s2078 (1 of 1) PTHR31747:SF3 - PROTEIN LSD1 C. rubella v1.1 2293   scaffold_7: 7818514-7820806

25 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Gorai.010G246900.1 G. raimondii v2.1 124253949 LSD1 zinc finger family protein 3 5268 Malvidae
Gorai.009G116000.1 G. raimondii v2.1 124253949 LSD1 zinc finger family protein 3 5268 Malvidae
Bostr.10689s0017.1.p B. stricta v1.2 124253949 LSD1 zinc finger family protein 1 5268 Malvidae
Potri.011G154800.2.p P. trichocarpa v3.1 124253949 LSD1 zinc finger family protein 2 5268 Malvidae
Potri.001G442400.1.p P. trichocarpa v3.1 124253949 LSD1 zinc finger family protein 2 5268 Malvidae
Podel.01G462900.1.p P. deltoides WV94 v2.1 124253949 LSD1 zinc finger family protein 2 5268 Malvidae
Podel.11G151700.1.p P. deltoides WV94 v2.1 124253949 LSD1 zinc finger family protein 2 5268 Malvidae
orange1.1g026941m C. sinensis v1.1 124253949 LSD1 zinc finger family protein 1 5268 Malvidae
AT4G20380.8 A. thaliana TAIR10 124253949 LSD1 zinc finger family protein 1 5268 Malvidae
Thhalv10001047m E. salsugineum v1.0 124253949 LSD1 zinc finger family protein 1 5268 Malvidae
Ciclev10016959m C. clementina v1.0 124253949 LSD1 zinc finger family protein 1 5268 Malvidae
Lus10008066 L. usitatissimum v1.0 124253949 LSD1 zinc finger family protein 1 5268 Malvidae
Gorai.011G005300.1 G. raimondii v2.1 124253949 LSD1 zinc finger family protein 3 5268 Malvidae
Thecc1EG026947t1 T. cacao v1.1 124253949 LSD1 zinc finger family protein 1 5268 Malvidae
Araha.5387s0004.1.p A. halleri v1.1 124253949 LSD1 zinc finger family protein 1 5268 Malvidae
Cagra.4169s0009.1.p C. grandiflora v1.1 124253949 LSD1 zinc finger family protein 1 5268 Malvidae
Brara.A01111.1.p B. rapa FPsc v1.3 124253949 LSD1 zinc finger family protein 3 5268 Malvidae
Brara.H01037.1.p B. rapa FPsc v1.3 124253949 LSD1 zinc finger family protein 3 5268 Malvidae
Brara.K01803.1.p B. rapa FPsc v1.3 124253949 LSD1 zinc finger family protein 3 5268 Malvidae
SapurV1A.0385s0090.1.p S. purpurea v1.0 124253949 LSD1 zinc finger family protein 2 5268 Malvidae
SapurV1A.0131s0170.1.p S. purpurea v1.0 124253949 LSD1 zinc finger family protein 2 5268 Malvidae
Manes.16G062400.1.p M. esculenta v6.1 124253949 LSD1 zinc finger family protein 2 5268 Malvidae
Manes.03G069700.1.p M. esculenta v6.1 124253949 LSD1 zinc finger family protein 2 5268 Malvidae
AL7G33510.t1 A. lyrata v2.1 124253949 LSD1 zinc finger family protein 1 5268 Malvidae
Carub.0007s2078.1.p C. rubella v1.1 124253949 LSD1 zinc finger family protein 1 5268 Malvidae