Protein Family : RING/U-box superfamily protein 124254063

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  39

39 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29703.t000068 (1 of 2) PTHR10044:SF98 - DETERIN R. communis v0.1 3930   29703: 340309-344238
29726.t000056 (1 of 1) KOG1003//KOG4172 - Actin filament-coating protein tropomyosin // Predicted E3 ubiquitin ligase R. communis v0.1 3533   29726: 346753-350285
orange1.1g002621m.g (1 of 1) KOG1003//KOG1853//KOG4172 - Actin filament-coating protein tropomyosin // LIS1-interacting protein NUDE // Predicted E3 ubiquitin ligase C. sinensis v1.1 4463   scaffold00011: 1696042-1700504
orange1.1g002997m.g (1 of 2) PTHR10044:SF98 - DETERIN C. sinensis v1.1 3679   scaffold00001: 5886825-5890503
AT4G03000 (1 of 1) KOG1853//KOG4172 - LIS1-interacting protein NUDE // Predicted E3 ubiquitin ligase A. thaliana TAIR10 3413   Chr4: 1324108-1327520
AT1G03365 (1 of 2) PTHR10044:SF98 - DETERIN A. thaliana TAIR10 3815   Chr1: 826569-830383
Thhalv10028432m.g (1 of 1) KOG1853 - LIS1-interacting protein NUDE E. salsugineum v1.0 3428   scaffold_3: 1469034-1472461
Thhalv10006805m.g (1 of 2) PTHR10044:SF98 - DETERIN E. salsugineum v1.0 3518   scaffold_5: 14795302-14798819
Ciclev10018843m.g (1 of 2) PTHR10044:SF98 - DETERIN C. clementina v1.0 3125   scaffold_3: 44994354-44997478
Ciclev10004269m.g (1 of 1) KOG1003//KOG1853//KOG4172 - Actin filament-coating protein tropomyosin // LIS1-interacting protein NUDE // Predicted E3 ubiquitin ligase C. clementina v1.0 4589   scaffold_9: 2480379-2484967
Lus10021954.g (1 of 2) KOG1003//KOG4172 - Actin filament-coating protein tropomyosin // Predicted E3 ubiquitin ligase L. usitatissimum v1.0 3316   scaffold164: 734266-737581
Lus10041244.g (1 of 5) PTHR10044:SF98 - DETERIN L. usitatissimum v1.0 3355   scaffold280: 1580531-1583885
Lus10041245.g (1 of 1) KOG1003//KOG2885//KOG4172 - Actin filament-coating protein tropomyosin // Uncharacterized conserved protein // Predicted E3 ubiquitin ligase L. usitatissimum v1.0 2805   scaffold280: 1585912-1588716
Lus10041246.g (1 of 2) KOG1003//KOG4172 - Actin filament-coating protein tropomyosin // Predicted E3 ubiquitin ligase L. usitatissimum v1.0 3316   scaffold280: 1589854-1593169
Gorai.005G056100 (1 of 3) PTHR10044:SF98 - DETERIN G. raimondii v2.1 4134   Chr05: 5701345-5705478
Gorai.008G006200 (1 of 3) PTHR10044:SF98 - DETERIN G. raimondii v2.1 4085   Chr08: 767962-772046
Gorai.006G256200 (1 of 1) KOG1003//KOG4172 - Actin filament-coating protein tropomyosin // Predicted E3 ubiquitin ligase G. raimondii v2.1 4714   Chr06: 49843911-49848624
Thecc1EG004480 (1 of 2) PTHR10044:SF98 - DETERIN T. cacao v1.1 4634   scaffold_1: 31814969-31819602
Thecc1EG021082 (1 of 1) KOG1003//KOG4172 - Actin filament-coating protein tropomyosin // Predicted E3 ubiquitin ligase T. cacao v1.1 6956   scaffold_4: 31557205-31564160
Araha.5052s0032 (1 of 2) PTHR10044:SF98 - DETERIN A. halleri v1.1 3606   Scaffold5052: 111837-115442
Araha.39079s0005 (1 of 1) KOG1853 - LIS1-interacting protein NUDE A. halleri v1.1 3460   Scaffold39079: 12200-15659
Cagra.0897s0042 (1 of 2) PTHR10044:SF98 - DETERIN C. grandiflora v1.1 3780   Scaffold897: 154266-158045
Cagra.2552s0027 (1 of 2) PTHR10044:SF98 - DETERIN C. grandiflora v1.1 3660   Scaffold2552: 85351-89010
Brara.I00195 (1 of 2) PTHR10044:SF98 - DETERIN B. rapa FPsc v1.3 2677   A09: 1138527-1141203
Brara.J00178 (1 of 2) PTHR10044:SF98 - DETERIN B. rapa FPsc v1.3 3545   A10: 945234-948778
Bostr.2983s0142 (1 of 2) PTHR10044:SF98 - DETERIN B. stricta v1.2 3449   Scaffold2983: 853991-857439
Bostr.26675s0414 (1 of 2) PTHR10044:SF98 - DETERIN B. stricta v1.2 3804   Scaffold26675: 2440125-2443928
SapurV1A.0152s0470 (1 of 2) PTHR10044:SF98 - DETERIN S. purpurea v1.0 4617   chr10: 1139042-1143658
SapurV1A.0407s0180 (1 of 2) PTHR10044:SF98 - DETERIN S. purpurea v1.0 4694   chr08: 14214463-14219156
Manes.03G188200 (1 of 10) PTHR10044//PTHR10044:SF81 - INHIBITOR OF APOPTOSIS // SUBFAMILY NOT NAMED M. esculenta v6.1 4781   Chromosome03: 27321805-27326585

39 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Lus10041246 L. usitatissimum v1.0 124254063 RING/U-box superfamily protein 4 5268 Malvidae
Lus10041245 L. usitatissimum v1.0 124254063 RING/U-box superfamily protein 4 5268 Malvidae
Thecc1EG021082t1 T. cacao v1.1 124254063 RING/U-box superfamily protein 2 5268 Malvidae
Araha.39079s0005.1.p A. halleri v1.1 124254063 RING/U-box superfamily protein 2 5268 Malvidae
Cagra.2552s0027.1.p C. grandiflora v1.1 124254063 RING/U-box superfamily protein 2 5268 Malvidae
SapurV1A.0152s0470.1.p S. purpurea v1.0 124254063 RING/U-box superfamily protein 2 5268 Malvidae
Potri.010G027900.8.p P. trichocarpa v3.1 124254063 RING/U-box superfamily protein 2 5268 Malvidae
Potri.008G198300.1.p P. trichocarpa v3.1 124254063 RING/U-box superfamily protein 2 5268 Malvidae
Podel.10G023000.1.p P. deltoides WV94 v2.1 124254063 RING/U-box superfamily protein 2 5268 Malvidae
Carub.0001s0249.1.p C. rubella v1.1 124254063 RING/U-box superfamily protein 2 5268 Malvidae
29703.m001532 R. communis v0.1 124254063 RING/U-box superfamily protein 2 5268 Malvidae
29726.m003944 R. communis v0.1 124254063 RING/U-box superfamily protein 2 5268 Malvidae
orange1.1g002621m C. sinensis v1.1 124254063 RING/U-box superfamily protein 2 5268 Malvidae
orange1.1g002997m C. sinensis v1.1 124254063 RING/U-box superfamily protein 2 5268 Malvidae
AT1G03365.1 A. thaliana TAIR10 124254063 RING/U-box superfamily protein 2 5268 Malvidae
AT4G03000.1 A. thaliana TAIR10 124254063 RING/U-box superfamily protein 2 5268 Malvidae
Thhalv10006805m E. salsugineum v1.0 124254063 RING/U-box superfamily protein 2 5268 Malvidae
Thhalv10028432m E. salsugineum v1.0 124254063 RING/U-box superfamily protein 2 5268 Malvidae
Ciclev10004269m C. clementina v1.0 124254063 RING/U-box superfamily protein 2 5268 Malvidae
Ciclev10018843m C. clementina v1.0 124254063 RING/U-box superfamily protein 2 5268 Malvidae
Lus10021954 L. usitatissimum v1.0 124254063 RING/U-box superfamily protein 4 5268 Malvidae
Lus10041244 L. usitatissimum v1.0 124254063 RING/U-box superfamily protein 4 5268 Malvidae
Gorai.008G006200.1 G. raimondii v2.1 124254063 RING/U-box superfamily protein 3 5268 Malvidae
Gorai.005G056100.1 G. raimondii v2.1 124254063 RING/U-box superfamily protein 3 5268 Malvidae
Gorai.006G256200.1 G. raimondii v2.1 124254063 RING/U-box superfamily protein 3 5268 Malvidae
Thecc1EG004480t1 T. cacao v1.1 124254063 RING/U-box superfamily protein 2 5268 Malvidae
Araha.5052s0032.1.p A. halleri v1.1 124254063 RING/U-box superfamily protein 2 5268 Malvidae
Cagra.0897s0042.1.p C. grandiflora v1.1 124254063 RING/U-box superfamily protein 2 5268 Malvidae
Brara.I00195.1.p B. rapa FPsc v1.3 124254063 RING/U-box superfamily protein 2 5268 Malvidae
Brara.J00178.1.p B. rapa FPsc v1.3 124254063 RING/U-box superfamily protein 2 5268 Malvidae