Protein Family : RING/U-box superfamily protein 123743659

Method ID:  5271 Method Name:  Pentapetalae
Sequence Alignment:  View MSA Member Count:  82

82 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29703.t000068 (1 of 2) PTHR10044:SF98 - DETERIN R. communis v0.1 3930   29703: 340309-344238
29726.t000056 (1 of 1) KOG1003//KOG4172 - Actin filament-coating protein tropomyosin // Predicted E3 ubiquitin ligase R. communis v0.1 3533   29726: 346753-350285
Cucsa.253800 (1 of 1) PTHR10044:SF98 - DETERIN C. sativus v1.0 3490   scaffold02229: 2308687-2312176
orange1.1g002621m.g (1 of 1) KOG1003//KOG1853//KOG4172 - Actin filament-coating protein tropomyosin // LIS1-interacting protein NUDE // Predicted E3 ubiquitin ligase C. sinensis v1.1 4463   scaffold00011: 1696042-1700504
orange1.1g002997m.g (1 of 2) PTHR10044:SF98 - DETERIN C. sinensis v1.1 3679   scaffold00001: 5886825-5890503
AT4G03000 (1 of 1) KOG1853//KOG4172 - LIS1-interacting protein NUDE // Predicted E3 ubiquitin ligase A. thaliana TAIR10 3413   Chr4: 1324108-1327520
AT1G03365 (1 of 2) PTHR10044:SF98 - DETERIN A. thaliana TAIR10 3815   Chr1: 826569-830383
Thhalv10028432m.g (1 of 1) KOG1853 - LIS1-interacting protein NUDE E. salsugineum v1.0 3428   scaffold_3: 1469034-1472461
Thhalv10006805m.g (1 of 2) PTHR10044:SF98 - DETERIN E. salsugineum v1.0 3518   scaffold_5: 14795302-14798819
Ciclev10018843m.g (1 of 2) PTHR10044:SF98 - DETERIN C. clementina v1.0 3125   scaffold_3: 44994354-44997478
Ciclev10004269m.g (1 of 1) KOG1003//KOG1853//KOG4172 - Actin filament-coating protein tropomyosin // LIS1-interacting protein NUDE // Predicted E3 ubiquitin ligase C. clementina v1.0 4589   scaffold_9: 2480379-2484967
Lus10021954.g (1 of 2) KOG1003//KOG4172 - Actin filament-coating protein tropomyosin // Predicted E3 ubiquitin ligase L. usitatissimum v1.0 3316   scaffold164: 734266-737581
Lus10041244.g (1 of 5) PTHR10044:SF98 - DETERIN L. usitatissimum v1.0 3355   scaffold280: 1580531-1583885
Lus10041245.g (1 of 1) KOG1003//KOG2885//KOG4172 - Actin filament-coating protein tropomyosin // Uncharacterized conserved protein // Predicted E3 ubiquitin ligase L. usitatissimum v1.0 2805   scaffold280: 1585912-1588716
Lus10041246.g (1 of 2) KOG1003//KOG4172 - Actin filament-coating protein tropomyosin // Predicted E3 ubiquitin ligase L. usitatissimum v1.0 3316   scaffold280: 1589854-1593169
Gorai.005G056100 (1 of 3) PTHR10044:SF98 - DETERIN G. raimondii v2.1 4134   Chr05: 5701345-5705478
Gorai.008G006200 (1 of 3) PTHR10044:SF98 - DETERIN G. raimondii v2.1 4085   Chr08: 767962-772046
Gorai.006G256200 (1 of 1) KOG1003//KOG4172 - Actin filament-coating protein tropomyosin // Predicted E3 ubiquitin ligase G. raimondii v2.1 4714   Chr06: 49843911-49848624
Thecc1EG004480 (1 of 2) PTHR10044:SF98 - DETERIN T. cacao v1.1 4634   scaffold_1: 31814969-31819602
Thecc1EG021082 (1 of 1) KOG1003//KOG4172 - Actin filament-coating protein tropomyosin // Predicted E3 ubiquitin ligase T. cacao v1.1 6956   scaffold_4: 31557205-31564160
Migut.G00283 (1 of 1) KOG1003//KOG1853//KOG4172 - Actin filament-coating protein tropomyosin // LIS1-interacting protein NUDE // Predicted E3 ubiquitin ligase M. guttatus v2.0 4012   scaffold_7: 1676932-1680943
Migut.N02135 (1 of 5) PTHR10044:SF98 - DETERIN M. guttatus v2.0 4361   scaffold_14: 19229219-19233579
Araha.5052s0032 (1 of 2) PTHR10044:SF98 - DETERIN A. halleri v1.1 3606   Scaffold5052: 111837-115442
Araha.39079s0005 (1 of 1) KOG1853 - LIS1-interacting protein NUDE A. halleri v1.1 3460   Scaffold39079: 12200-15659
Cagra.0897s0042 (1 of 2) PTHR10044:SF98 - DETERIN C. grandiflora v1.1 3780   Scaffold897: 154266-158045
Cagra.2552s0027 (1 of 2) PTHR10044:SF98 - DETERIN C. grandiflora v1.1 3660   Scaffold2552: 85351-89010
Glyma.13G212200 (1 of 2) KOG1003//KOG2991//KOG4172 - Actin filament-coating protein tropomyosin // Splicing regulator // Predicted E3 ubiquitin ligase G. max Wm82.a2.v1 4481   Chr13: 32586534-32591014
Glyma.15G100500 (1 of 2) KOG1003//KOG2991//KOG4172 - Actin filament-coating protein tropomyosin // Splicing regulator // Predicted E3 ubiquitin ligase G. max Wm82.a2.v1 4351   Chr15: 7820694-7825044
Glyma.02G150400 (1 of 5) PTHR10044:SF98 - DETERIN G. max Wm82.a2.v1 4392   Chr02: 15481048-15485439
Brara.I00195 (1 of 2) PTHR10044:SF98 - DETERIN B. rapa FPsc v1.3 2677   A09: 1138527-1141203

82 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Cucsa.253800.1 C. sativus v1.0 123743659 RING/U-box superfamily protein 1 5271 Pentapetalae
orange1.1g002997m C. sinensis v1.1 123743659 RING/U-box superfamily protein 2 5271 Pentapetalae
Lus10041246 L. usitatissimum v1.0 123743659 RING/U-box superfamily protein 4 5271 Pentapetalae
Lus10041245 L. usitatissimum v1.0 123743659 RING/U-box superfamily protein 4 5271 Pentapetalae
Thecc1EG021082t1 T. cacao v1.1 123743659 RING/U-box superfamily protein 2 5271 Pentapetalae
Araha.39079s0005.1.p A. halleri v1.1 123743659 RING/U-box superfamily protein 2 5271 Pentapetalae
Cagra.2552s0027.1.p C. grandiflora v1.1 123743659 RING/U-box superfamily protein 2 5271 Pentapetalae
Migut.G00283.1.p M. guttatus v2.0 123743659 RING/U-box superfamily protein 2 5271 Pentapetalae
Glyma.02G150400.1.p G. max Wm82.a2.v1 123743659 RING/U-box superfamily protein 3 5271 Pentapetalae
SapurV1A.0152s0470.1.p S. purpurea v1.0 123743659 RING/U-box superfamily protein 2 5271 Pentapetalae
Eucgr.H03641.1.p E. grandis v2.0 123743659 RING/U-box superfamily protein 1 5271 Pentapetalae
Kalax.1213s0002.1.p K. laxiflora v1.1 123743659 RING/U-box superfamily protein 2 5271 Pentapetalae
Kalax.0715s0010.1.p K. laxiflora v1.1 123743659 RING/U-box superfamily protein 2 5271 Pentapetalae
Tp57577_TGAC_v2_mRNA18646 T. pratense v2 123743659 RING/U-box superfamily protein 3 5271 Pentapetalae
DCAR_023682 D. carota v2.0 123743659 RING/U-box superfamily protein 3 5271 Pentapetalae
DCAR_027130 D. carota v2.0 123743659 RING/U-box superfamily protein 3 5271 Pentapetalae
Solyc06g008900.2.1 S. lycopersicum ITAG2.4 123743659 RING/U-box superfamily protein 2 5271 Pentapetalae
AUR62020888-RA C. quinoa v1.0 123743659 RING/U-box superfamily protein 2 5271 Pentapetalae
AUR62018530-RA C. quinoa v1.0 123743659 RING/U-box superfamily protein 2 5271 Pentapetalae
Phvul.006G158500.1.p P. vulgaris v2.1 123743659 RING/U-box superfamily protein 2 5271 Pentapetalae
Potri.010G027900.8.p P. trichocarpa v3.1 123743659 RING/U-box superfamily protein 2 5271 Pentapetalae
Potri.008G198300.1.p P. trichocarpa v3.1 123743659 RING/U-box superfamily protein 2 5271 Pentapetalae
Oeu026086.1 O. europaea v1.0 123743659 RING/U-box superfamily protein 4 5271 Pentapetalae
Oeu026085.1 O. europaea v1.0 123743659 RING/U-box superfamily protein 4 5271 Pentapetalae
Oeu011182.2 O. europaea v1.0 123743659 RING/U-box superfamily protein 4 5271 Pentapetalae
VIT_205s0020g02320.5 V. vinifera v2.1 123743659 RING/U-box superfamily protein 1 5271 Pentapetalae
Lsat_1_v5_gn_3_27281.1 L. sativa V8 123743659 RING/U-box superfamily protein 3 5271 Pentapetalae
Lsat_1_v5_gn_3_27260.1 L. sativa V8 123743659 RING/U-box superfamily protein 3 5271 Pentapetalae
Lsat_1_v5_gn_0_45380.1 L. sativa V8 123743659 RING/U-box superfamily protein 3 5271 Pentapetalae
Carub.0001s0249.1.p C. rubella v1.1 123743659 RING/U-box superfamily protein 2 5271 Pentapetalae