Protein Family : DNA ligase IV 123748643

Method ID:  5271 Method Name:  Pentapetalae
Sequence Alignment:  View MSA Member Count:  39

39 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29462.t000005 (1 of 1) K10777 - DNA ligase 4 (LIG4, DNL4) R. communis v0.1 21065   29462: 147450-168514
orange1.1g001082m.g (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 C. sinensis v1.1 12379   scaffold00050: 352856-365234
AT5G57160 (1 of 1) K10777 - DNA ligase 4 (LIG4, DNL4) A. thaliana TAIR10 ATLIG4 6782   Chr5: 23154965-23161746
Thhalv10012474m.g (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 E. salsugineum v1.0 7134   scaffold_2: 9406894-9414027
Ciclev10007283m.g (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 C. clementina v1.0 11623   scaffold_1: 26692878-26704500
Lus10020013.g (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 L. usitatissimum v1.0 7166   scaffold23: 416793-423958
Gorai.013G243100 (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 G. raimondii v2.1 11037   Chr13: 56252514-56263550
Thecc1EG039460 (1 of 1) K10777 - DNA ligase 4 (LIG4, DNL4) T. cacao v1.1 59213   scaffold_9: 19431314-19490526
Migut.J00793 (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 M. guttatus v2.0 10298   scaffold_10: 4714458-4724755
Araha.8614s0002 (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 A. halleri v1.1 5655   Scaffold8614: 3246-8900
Cagra.0931s0001 (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 C. grandiflora v1.1 7291   Scaffold931: 3384-10674
Glyma.09G060100 (1 of 2) PTHR10459:SF72 - DNA LIGASE 4 G. max Wm82.a2.v1 9718   Chr09: 5561072-5570789
Glyma.15G166700 (1 of 2) PTHR10459:SF72 - DNA LIGASE 4 G. max Wm82.a2.v1 19817   Chr15: 14523368-14543184
Brara.J01141 (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 B. rapa FPsc v1.3 7036   A10: 10866667-10873702
Bostr.26833s0542 (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 B. stricta v1.2 7010   Scaffold26833: 2816495-2823504
Medtr2g038030 (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 M. truncatula Mt4.0v1 14841   chr2: 16517930-16532770
SapurV1A.0140s0200 (1 of 1) K10777 - DNA ligase 4 (LIG4, DNL4) S. purpurea v1.0 11573   chr18: 14370594-14382166
Eucgr.C00108 (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 E. grandis v2.0 8905   Chr03: 717907-726811
Prupe.1G074600 (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 P. persica v2.1 16269   Pp01: 5341126-5357394
Manes.14G158800 (1 of 2) PTHR10459:SF72 - DNA LIGASE 4 M. esculenta v6.1 29201   Chromosome14: 18903135-18932335
Kalax.0017s0050 (1 of 1) PF01068//PF04675//PF04679//PF12738 - ATP dependent DNA ligase domain (DNA_ligase_A_M) // DNA ligase N terminus (DNA_ligase_A_N) // ATP dependent DNA ligase C terminal region (DNA_ligase_A_C) // twin BRCT domain (PTCB-BRCT) K. laxiflora v1.1 9010   scaffold_17: 338494-347503
Kalax.0360s0047 (1 of 1) PF01068//PF04675//PF12738 - ATP dependent DNA ligase domain (DNA_ligase_A_M) // DNA ligase N terminus (DNA_ligase_A_N) // twin BRCT domain (PTCB-BRCT) K. laxiflora v1.1 8412   scaffold_360: 263290-271701
Kaladp0001s0308 (1 of 1) K10777 - DNA ligase 4 (LIG4, DNL4) K. fedtschenkoi v1.1 8828   Scaffold_1: 1854070-1862897
AL8G33090 (1 of 1) K10777 - DNA ligase 4 (LIG4, DNL4) A. lyrata v2.1 7015   scaffold_8: 17946259-17953273
DCAR_020147 (1 of 1) K10777 - DNA ligase 4 (LIG4, DNL4) D. carota v2.0 20145   DCARv2_Chr6: 33768237-33788381
Solyc07g018000.2 (1 of 2) K10777 - DNA ligase 4 (LIG4, DNL4) S. lycopersicum ITAG2.4 11614   SL2.50ch07: 8779431-8791044
AUR62039835 (1 of 2) K10777 - DNA ligase 4 (LIG4, DNL4) C. quinoa v1.0 3603   C_Quinoa_Scaffold_4462: 90068-93670
AUR62000175 (1 of 2) K10777 - DNA ligase 4 (LIG4, DNL4) C. quinoa v1.0 3597   C_Quinoa_Scaffold_2088: 1896910-1900506
Phvul.009G235800 (1 of 1) K10777 - DNA ligase 4 (LIG4, DNL4) P. vulgaris v2.1 15524   Chr09: 35353240-35368763
Potri.018G141900 (1 of 1) K10777 - DNA ligase 4 (LIG4, DNL4) P. trichocarpa v3.1 11605   Chr18: 16196280-16207884

39 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Thecc1EG039460t1 T. cacao v1.1 123748643 DNA ligase IV 1 5271 Pentapetalae
Migut.J00793.1.p M. guttatus v2.0 123748643 DNA ligase IV 1 5271 Pentapetalae
Glyma.15G166700.1.p G. max Wm82.a2.v1 123748643 DNA ligase IV 2 5271 Pentapetalae
SapurV1A.0140s0200.1.p S. purpurea v1.0 123748643 DNA ligase IV 1 5271 Pentapetalae
Kalax.0360s0047.1.p K. laxiflora v1.1 123748643 DNA ligase IV 2 5271 Pentapetalae
DCAR_020147 D. carota v2.0 123748643 DNA ligase IV 1 5271 Pentapetalae
Solyc07g018000.2.1 S. lycopersicum ITAG2.4 123748643 DNA ligase IV 1 5271 Pentapetalae
AUR62000175-RA C. quinoa v1.0 123748643 DNA ligase IV 2 5271 Pentapetalae
AUR62039835-RA C. quinoa v1.0 123748643 DNA ligase IV 2 5271 Pentapetalae
Phvul.009G235800.1.p P. vulgaris v2.1 123748643 DNA ligase IV 1 5271 Pentapetalae
Oeu019558.1 O. europaea v1.0 123748643 DNA ligase IV 1 5271 Pentapetalae
VIT_211s0052g00070.1 V. vinifera v2.1 123748643 DNA ligase IV 1 5271 Pentapetalae
HanXRQChr05g0141031 H. annuus r1.2 123748643 DNA ligase IV 1 5271 Pentapetalae
gene17266-v2.0.a2-hybrid.t1 F. vesca v2.0.a2 123748643 DNA ligase IV 1 5271 Pentapetalae
29462.m000377 R. communis v0.1 123748643 DNA ligase IV 1 5271 Pentapetalae
orange1.1g001082m C. sinensis v1.1 123748643 DNA ligase IV 1 5271 Pentapetalae
AT5G57160.1 A. thaliana TAIR10 123748643 DNA ligase IV 1 5271 Pentapetalae
Thhalv10012474m E. salsugineum v1.0 123748643 DNA ligase IV 1 5271 Pentapetalae
Ciclev10007283m C. clementina v1.0 123748643 DNA ligase IV 1 5271 Pentapetalae
Lus10020013 L. usitatissimum v1.0 123748643 DNA ligase IV 1 5271 Pentapetalae
Gorai.013G243100.1 G. raimondii v2.1 123748643 DNA ligase IV 1 5271 Pentapetalae
Araha.8614s0002.1.p A. halleri v1.1 123748643 DNA ligase IV 1 5271 Pentapetalae
Cagra.0931s0001.1.p C. grandiflora v1.1 123748643 DNA ligase IV 1 5271 Pentapetalae
Glyma.09G060100.1.p G. max Wm82.a2.v1 123748643 DNA ligase IV 2 5271 Pentapetalae
Brara.J01141.1.p B. rapa FPsc v1.3 123748643 DNA ligase IV 1 5271 Pentapetalae
Bostr.26833s0542.1.p B. stricta v1.2 123748643 DNA ligase IV 1 5271 Pentapetalae
Medtr2g038030.1 M. truncatula Mt4.0v1 123748643 DNA ligase IV 1 5271 Pentapetalae
Eucgr.C00108.1.p E. grandis v2.0 123748643 DNA ligase IV 1 5271 Pentapetalae
Prupe.1G074600.1.p P. persica v2.1 123748643 DNA ligase IV 1 5271 Pentapetalae
Manes.14G158800.1.p M. esculenta v6.1 123748643 DNA ligase IV 1 5271 Pentapetalae