Protein Family : polyubiquitin 10 123752540

Method ID:  5271 Method Name:  Pentapetalae
Sequence Alignment:  View MSA Member Count:  326

326 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30169.t000100 (1 of 3) K12158 - ubiquitin-like protein Nedd8 (NEDD8) R. communis v0.1 1253   30169: 489546-490798
28617.t000002 (1 of 7) K08770 - ubiquitin C (UBC) R. communis v0.1 474   28617: 31610-32083
Cucsa.118440 (1 of 3) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) C. sativus v1.0 3058   scaffold00998: 336804-339861
Cucsa.059730 (1 of 3) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) C. sativus v1.0 462   scaffold00621: 287985-288446
Cucsa.230310 (1 of 3) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) C. sativus v1.0 744   scaffold01956: 1-744
Cucsa.266970 (1 of 6) KOG0001//KOG0005 - Ubiquitin and ubiquitin-like proteins // Ubiquitin-like protein C. sativus v1.0 2029   scaffold02364: 12091-14119
orange1.1g040824m.g (1 of 4) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) C. sinensis v1.1 1766   scaffold00097: 53662-55427
orange1.1g036691m.g (1 of 2) PTHR10666:SF124 - GH17761P C. sinensis v1.1 1281   scaffold00088: 48759-50039
orange1.1g009518m.g (1 of 2) PTHR10666:SF150 - POLYUBIQUITIN 3 C. sinensis v1.1 2783   scaffold00152: 216388-219170
orange1.1g012714m.g (1 of 2) PTHR10666:SF150 - POLYUBIQUITIN 3 C. sinensis v1.1 2361   scaffold00191: 130881-133241
orange1.1g048350m.g (1 of 4) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) C. sinensis v1.1 360   scaffold00191: 230978-231337
orange1.1g026940m.g (1 of 16) KOG0001 - Ubiquitin and ubiquitin-like proteins C. sinensis v1.1 1725   scaffold00400: 111111-112835
orange1.1g026932m.g (1 of 16) KOG0001 - Ubiquitin and ubiquitin-like proteins C. sinensis v1.1 1673   scaffold00172: 256273-257945
orange1.1g023198m.g (1 of 2) PTHR10666:SF124 - GH17761P C. sinensis v1.1 1742   scaffold00591: 49336-51077
AT4G02890 (1 of 3) K04551//K08770 - ubiquitin B (UBB) // ubiquitin C (UBC) A. thaliana TAIR10 UBQ14 1502   Chr4: 1278530-1280031
AT4G05320 (1 of 1) PTHR10666//PTHR10666:SF150//PTHR10666:SF155 - UBIQUITIN // POLYUBIQUITIN 3 // POLYUBIQUITIN 4 A. thaliana TAIR10 UBQ10 2139   Chr4: 2718170-2720308
AT4G05050 (1 of 1) K04551//K08770//K12158 - ubiquitin B (UBB) // ubiquitin C (UBC) // ubiquitin-like protein Nedd8 (NEDD8) A. thaliana TAIR10 UBQ11 1383   Chr4: 2588004-2589386
AT5G03240 (1 of 3) K04551//K08770 - ubiquitin B (UBB) // ubiquitin C (UBC) A. thaliana TAIR10 UBQ3 1791   Chr5: 771725-773515
AT5G20620 (1 of 1) PTHR10666//PTHR10666:SF155 - UBIQUITIN // POLYUBIQUITIN 4 A. thaliana TAIR10 UBQ4 1876   Chr5: 6973071-6974946
AT3G09790 (1 of 1) PTHR10666//PTHR10666:SF120 - UBIQUITIN // POLYUBIQUITIN 8-RELATED A. thaliana TAIR10 UBQ8 2331   Chr3: 3003862-3006192
AT1G31340 (1 of 4) K12158 - ubiquitin-like protein Nedd8 (NEDD8) A. thaliana TAIR10 RUB1 1614   Chr1: 11217845-11219458
AT1G55060 (1 of 13) K08770 - ubiquitin C (UBC) A. thaliana TAIR10 UBQ12 693   Chr1: 20549533-20550225
AT2G35635 (1 of 4) K12158 - ubiquitin-like protein Nedd8 (NEDD8) A. thaliana TAIR10 UBQ7 1147   Chr2: 14980970-14982116
Thhalv10017351m.g (1 of 3) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) E. salsugineum v1.0 1421   scaffold_10: 8289779-8291199
Thhalv10022008m.g (1 of 20) KOG0001 - Ubiquitin and ubiquitin-like proteins E. salsugineum v1.0 699   scaffold_13: 6393569-6394267
Thhalv10028224m.g (1 of 3) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) E. salsugineum v1.0 705   scaffold_14: 3270000-3270704
Thhalv10028728m.g (1 of 3) PTHR10666:SF155 - POLYUBIQUITIN 4 E. salsugineum v1.0 1945   scaffold_3: 1938112-1940056
Thhalv10028730m.g (1 of 3) PTHR10666:SF155 - POLYUBIQUITIN 4 E. salsugineum v1.0 1985   scaffold_3: 1924916-1926900
Thhalv10008986m.g (1 of 3) PF00240//PF11976 - Ubiquitin family (ubiquitin) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) E. salsugineum v1.0 1851   scaffold_5: 3597669-3599519
Thhalv10011466m.g (1 of 1) PTHR10666:SF150 - POLYUBIQUITIN 3 E. salsugineum v1.0 2246   scaffold_7: 4566838-4569083

326 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g048350m C. sinensis v1.1 123752540 polyubiquitin 10 8 5271 Pentapetalae
orange1.1g012714m C. sinensis v1.1 123752540 polyubiquitin 10 8 5271 Pentapetalae
orange1.1g040824m C. sinensis v1.1 123752540 polyubiquitin 10 8 5271 Pentapetalae
orange1.1g026932m C. sinensis v1.1 123752540 polyubiquitin 10 8 5271 Pentapetalae
AT4G05320.2 A. thaliana TAIR10 123752540 polyubiquitin 10 9 5271 Pentapetalae
AT3G09790.1 A. thaliana TAIR10 123752540 polyubiquitin 10 9 5271 Pentapetalae
AT5G03240.1 A. thaliana TAIR10 123752540 polyubiquitin 10 9 5271 Pentapetalae
Thhalv10022008m E. salsugineum v1.0 123752540 polyubiquitin 10 8 5271 Pentapetalae
Ciclev10008240m C. clementina v1.0 123752540 polyubiquitin 10 13 5271 Pentapetalae
Ciclev10012652m C. clementina v1.0 123752540 polyubiquitin 10 13 5271 Pentapetalae
Ciclev10012654m C. clementina v1.0 123752540 polyubiquitin 10 13 5271 Pentapetalae
Ciclev10012291m C. clementina v1.0 123752540 polyubiquitin 10 13 5271 Pentapetalae
Gorai.009G426900.1 G. raimondii v2.1 123752540 polyubiquitin 10 14 5271 Pentapetalae
Gorai.002G147600.1 G. raimondii v2.1 123752540 polyubiquitin 10 14 5271 Pentapetalae
Gorai.011G176700.1 G. raimondii v2.1 123752540 polyubiquitin 10 14 5271 Pentapetalae
Gorai.012G038400.1 G. raimondii v2.1 123752540 polyubiquitin 10 14 5271 Pentapetalae
Araha.0138s0017.1.p A. halleri v1.1 123752540 polyubiquitin 10 6 5271 Pentapetalae
Araha.17083s0011.1.p A. halleri v1.1 123752540 polyubiquitin 10 6 5271 Pentapetalae
Araha.14123s0001.1.p A. halleri v1.1 123752540 polyubiquitin 10 6 5271 Pentapetalae
Cagra.5286s0002.1.p C. grandiflora v1.1 123752540 polyubiquitin 10 11 5271 Pentapetalae
Cagra.8807s0005.1.p C. grandiflora v1.1 123752540 polyubiquitin 10 11 5271 Pentapetalae
Cagra.1262s0030.1.p C. grandiflora v1.1 123752540 polyubiquitin 10 11 5271 Pentapetalae
Migut.E01435.1.p M. guttatus v2.0 123752540 polyubiquitin 10 12 5271 Pentapetalae
Migut.L01822.1.p M. guttatus v2.0 123752540 polyubiquitin 10 12 5271 Pentapetalae
Migut.L01673.1.p M. guttatus v2.0 123752540 polyubiquitin 10 12 5271 Pentapetalae
Migut.J00500.1.p M. guttatus v2.0 123752540 polyubiquitin 10 12 5271 Pentapetalae
Migut.M01283.1.p M. guttatus v2.0 123752540 polyubiquitin 10 12 5271 Pentapetalae
Migut.M01808.1.p M. guttatus v2.0 123752540 polyubiquitin 10 12 5271 Pentapetalae
Migut.M01282.1.p M. guttatus v2.0 123752540 polyubiquitin 10 12 5271 Pentapetalae
Migut.H01853.1.p M. guttatus v2.0 123752540 polyubiquitin 10 12 5271 Pentapetalae