Protein Family : RNA-binding (RRM/RBD/RNP motifs) family protein 123753292

Method ID:  5271 Method Name:  Pentapetalae
Sequence Alignment:  View MSA Member Count:  100

100 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30032.t000019 (1 of 4) K13195 - cold-inducible RNA-binding protein (CIRBP) R. communis v0.1 1312   30032: 117818-119129
30055.t000068 (1 of 4) K13195 - cold-inducible RNA-binding protein (CIRBP) R. communis v0.1 1976   30055: 358373-360348
Cucsa.112520 (1 of 163) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. sativus v1.0 2979   scaffold00953: 1059499-1062477
Cucsa.241400 (1 of 8) KOG0114 - Predicted RNA-binding protein (RRM superfamily) C. sativus v1.0 3223   scaffold02047: 1418659-1421881
orange1.1g048030m.g (1 of 186) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. sinensis v1.1 440   scaffold00918: 40534-40973
orange1.1g032812m.g (1 of 186) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. sinensis v1.1 1506   scaffold02155: 989-2494
orange1.1g032528m.g (1 of 186) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. sinensis v1.1 1537   scaffold00018: 351734-353270
orange1.1g030819m.g (1 of 186) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. sinensis v1.1 3861   scaffold00459: 54254-58114
AT5G06210 (1 of 234) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) A. thaliana TAIR10 1270   Chr5: 1878471-1879740
AT1G73530 (1 of 8) KOG0114 - Predicted RNA-binding protein (RRM superfamily) A. thaliana TAIR10 1762   Chr1: 27643633-27645394
AT2G27330 (1 of 234) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) A. thaliana TAIR10 1599   Chr2: 11695032-11696630
Thhalv10014928m.g (1 of 230) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) E. salsugineum v1.0 1400   scaffold_2: 1851113-1852512
Thhalv10019191m.g (1 of 6) KOG0114 - Predicted RNA-binding protein (RRM superfamily) E. salsugineum v1.0 1487   scaffold_9: 3144026-3145512
Ciclev10012994m.g (1 of 192) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. clementina v1.0 2096   scaffold_6: 20226864-20228959
Ciclev10029552m.g (1 of 192) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. clementina v1.0 1622   scaffold_8: 19132837-19134458
Ciclev10022555m.g (1 of 192) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. clementina v1.0 3632   scaffold_3: 16054038-16057669
Ciclev10023396m.g (1 of 192) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. clementina v1.0 1273   scaffold_3: 31457875-31459147
Ciclev10024110m.g (1 of 4) KOG0114 - Predicted RNA-binding protein (RRM superfamily) C. clementina v1.0 1384   scaffold_3: 31429769-31431152
Lus10042293.g (1 of 373) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) L. usitatissimum v1.0 1586   scaffold123: 1593871-1595456
Lus10013306.g (1 of 373) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) L. usitatissimum v1.0 1442   scaffold812: 55722-57163
Lus10026364.g (1 of 373) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) L. usitatissimum v1.0 1017   scaffold898: 782233-783249
Gorai.006G152700 (1 of 7) KOG0121 - Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily) G. raimondii v2.1 1702   Chr06: 41157674-41159375
Thecc1EG022707 (1 of 13) KOG0114 - Predicted RNA-binding protein (RRM superfamily) T. cacao v1.1 1914   scaffold_5: 6767465-6769378
Thecc1EG041357 (1 of 1) K13195 - cold-inducible RNA-binding protein (CIRBP) T. cacao v1.1 1898   scaffold_9: 37222756-37224653
Migut.D02054 (1 of 222) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) M. guttatus v2.0 1584   scaffold_4: 17743878-17745461
Migut.J00999 (1 of 222) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) M. guttatus v2.0 1717   scaffold_10: 6278136-6279852
Araha.21076s0007 (1 of 16) KOG0114 - Predicted RNA-binding protein (RRM superfamily) A. halleri v1.1 1779   Scaffold21076: 21132-22910
Araha.9394s0005 (1 of 225) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) A. halleri v1.1 1220   Scaffold9394: 11310-12529
Cagra.2117s0042 (1 of 222) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. grandiflora v1.1 1226   Scaffold2117: 159073-160298
Cagra.3125s0009 (1 of 222) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. grandiflora v1.1 1695   Scaffold3125: 38508-40202

100 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30032.m000469 R. communis v0.1 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
orange1.1g030819m C. sinensis v1.1 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5271 Pentapetalae
Lus10013306 L. usitatissimum v1.0 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae
Lus10042293 L. usitatissimum v1.0 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae
Lus10026364 L. usitatissimum v1.0 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae
Cagra.2117s0042.1.p C. grandiflora v1.1 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
Glyma.01G232300.1.p G. max Wm82.a2.v1 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5271 Pentapetalae
Glyma.16G217600.1.p G. max Wm82.a2.v1 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5271 Pentapetalae
Medtr7g105260.1 M. truncatula Mt4.0v1 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae
SapurV1A.1211s0070.1.p S. purpurea v1.0 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae
Eucgr.H00611.1.p E. grandis v2.0 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae
Prupe.7G101000.1.p P. persica v2.1 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae
Kalax.0263s0058.1.p K. laxiflora v1.1 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5271 Pentapetalae
Kalax.0025s0101.1.p K. laxiflora v1.1 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5271 Pentapetalae
Kalax.0091s0090.1.p K. laxiflora v1.1 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5271 Pentapetalae
Kaladp0040s0636.1.p K. fedtschenkoi v1.1 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
Kaladp0059s0071.1.p K. fedtschenkoi v1.1 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
AL6G16210.t1 A. lyrata v2.1 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
Tp57577_TGAC_v2_mRNA24886 T. pratense v2 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae
Tp57577_TGAC_v2_mRNA24150 T. pratense v2 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae
Tp57577_TGAC_v2_mRNA12584 T. pratense v2 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae
AUR62028480-RA C. quinoa v1.0 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5271 Pentapetalae
Phvul.001G192800.1.p P. vulgaris v2.1 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
Potri.012G038200.1.p P. trichocarpa v3.1 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae
Podel.09G166400.1.p P. deltoides WV94 v2.1 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae
VIT_206s0080g00870.2 V. vinifera v2.1 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae
Lsat_1_v5_gn_2_11821.1 L. sativa V8 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
Carub.0004s0796.1.p C. rubella v1.1 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 7 5271 Pentapetalae
Carub.0002s1022.1.p C. rubella v1.1 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 7 5271 Pentapetalae
Carub.0002s1020.1.p C. rubella v1.1 123753292 RNA-binding (RRM/RBD/RNP motifs) family protein 7 5271 Pentapetalae