Protein Family : nucleic acid binding;zinc ion binding 123753554

Method ID:  5271 Method Name:  Pentapetalae
Sequence Alignment:  View MSA Member Count:  2679

4264 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29700.t000008 (1 of 40) PF13966 - zinc-binding in reverse transcriptase (zf-RVT) R. communis v0.1 567   29700: 180872-181438
29739.t000055 (1 of 3) PTHR19446//PTHR19446:SF387 - REVERSE TRANSCRIPTASES // SUBFAMILY NOT NAMED R. communis v0.1 1189   29739: 322318-323506
29739.t000102 (1 of 129) PF13456 - Reverse transcriptase-like (RVT_3) R. communis v0.1 968   29739: 629714-630681
29740.t000003 (1 of 129) PF13456 - Reverse transcriptase-like (RVT_3) R. communis v0.1 396   29740: 38230-38625
29748.t000008 (1 of 18) PTHR33033:SF17 - POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN R. communis v0.1 444   29748: 183761-184204
29810.t000011 (1 of 129) PF13456 - Reverse transcriptase-like (RVT_3) R. communis v0.1 288   29810: 60449-60736
29813.t000056 (1 of 5) PF13456//PF13966 - Reverse transcriptase-like (RVT_3) // zinc-binding in reverse transcriptase (zf-RVT) R. communis v0.1 1557   29813: 352112-353668
29825.t000007 (1 of 129) PF13456 - Reverse transcriptase-like (RVT_3) R. communis v0.1 342   29825: 51189-51530
29836.t000032 hypothetical protein R. communis v0.1 1826   29836: 382462-384287
29838.t000053 (1 of 5) PF13456//PF13966 - Reverse transcriptase-like (RVT_3) // zinc-binding in reverse transcriptase (zf-RVT) R. communis v0.1 1577   29838: 331430-333006
29848.t000190 conserved hypothetical protein R. communis v0.1 495   29848: 1071133-1071627
29854.t000023 (1 of 40) PF13966 - zinc-binding in reverse transcriptase (zf-RVT) R. communis v0.1 848   29854: 614831-615678
29854.t000025 (1 of 32) PF03372 - Endonuclease/Exonuclease/phosphatase family (Exo_endo_phos) R. communis v0.1 1255   29854: 622299-623553
29869.t000011 (1 of 7) PTHR31286:SF1 - NUCLEIC ACID BINDING / ZINC ION BINDING PROTEIN-RELATED R. communis v0.1 969   29869: 146103-147071
29869.t000033 (1 of 18) PTHR33033:SF17 - POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN R. communis v0.1 450   29869: 339226-339675
29877.t000018 (1 of 40) PF13966 - zinc-binding in reverse transcriptase (zf-RVT) R. communis v0.1 402   29877: 161688-162089
29880.t000005 (1 of 7) PTHR31286:SF1 - NUCLEIC ACID BINDING / ZINC ION BINDING PROTEIN-RELATED R. communis v0.1 312   29880: 207998-208309
29888.t000012 (1 of 129) PF13456 - Reverse transcriptase-like (RVT_3) R. communis v0.1 360   29888: 170814-171173
29904.t000139 (1 of 129) PF13456 - Reverse transcriptase-like (RVT_3) R. communis v0.1 378   29904: 948845-949222
29910.t000021 (1 of 5) PF13456//PF13966 - Reverse transcriptase-like (RVT_3) // zinc-binding in reverse transcriptase (zf-RVT) R. communis v0.1 1341   29910: 287513-288853
29927.t000017 conserved hypothetical protein R. communis v0.1 597   29927: 154075-154671
29933.t000066 (1 of 5) 3.1.26.4 - Ribonuclease H / RNase H R. communis v0.1 606   29933: 360620-361225
29939.t000005 (1 of 18) PTHR33033:SF17 - POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN R. communis v0.1 630   29939: 119267-119896
29942.t000003 (1 of 36) PF14111 - Domain of unknown function (DUF4283) (DUF4283) R. communis v0.1 405   29942: 34428-34832
29968.t000010 (1 of 18) PTHR19446:SF340 - REVERSE TRANSCRIPTASE-RELATED R. communis v0.1 844   29968: 74158-75001
29970.t000060 (1 of 18) PTHR33033:SF17 - POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN R. communis v0.1 445   29970: 454739-455183
29977.t000009 (1 of 3) PF14111//PF14392 - Domain of unknown function (DUF4283) (DUF4283) // Zinc knuckle (zf-CCHC_4) R. communis v0.1 1047   29977: 59767-60813
29989.t000023 conserved hypothetical protein R. communis v0.1 372   29989: 219971-220342
29989.t000024 (1 of 7) PTHR31286:SF1 - NUCLEIC ACID BINDING / ZINC ION BINDING PROTEIN-RELATED R. communis v0.1 597   29989: 224613-225209
30000.t000018 (1 of 129) PF13456 - Reverse transcriptase-like (RVT_3) R. communis v0.1 660   30000: 169285-169944

3751 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
28637.m000209 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
28657.m000384 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
29003.m000063 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
29615.m000507 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
29617.m000136 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
29630.m000799 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
29641.m000379 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
29661.m000941 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
29673.m000908 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
29679.m000386 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
29739.m003666 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
29740.m000471 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
29813.m001504 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
29825.m000319 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
29836.m000585 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
29854.m001112 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
29854.m001114 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
29927.m000607 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
29970.m001031 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
30024.m001719 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
30128.m009032 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
30128.m009031 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
30152.m002430 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
30169.m006428 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
30170.m013825 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
30204.m001781 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
30205.m001571 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
30221.m002228 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
39948.m000032 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae
47678.m000007 R. communis v0.1 123753554 nucleic acid binding;zinc ion binding 87 5271 Pentapetalae