Protein Family : chromatin remodeling factor CHD3 (PICKLE) 122789120

Method ID:  5272 Method Name:  Eudicot
Sequence Alignment:  View MSA Member Count:  49

49 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29848.t000113 (1 of 1) K11643 - chromodomain-helicase-DNA-binding protein 4 (CHD4, MI2B) R. communis v0.1 15217   29848: 657103-672319
Cucsa.271650 (1 of 1) PF06461 - Domain of Unknown Function (DUF1086) (DUF1086) C. sativus v1.0 16165   scaffold02500: 469005-485169
orange1.1g000482m.g (1 of 2) PTHR10799:SF741 - HELICASE PROTEIN MOM1-RELATED C. sinensis v1.1 17659   scaffold00025: 1131103-1148761
AT2G25170 (1 of 1) K11643 - chromodomain-helicase-DNA-binding protein 4 (CHD4, MI2B) A. thaliana TAIR10 PKL 10180   Chr2: 10713807-10723986
Thhalv10000014m.g (1 of 1) PF00271//PF00385//PF00628//PF04851//PF06461//PF06465 - Helicase conserved C-terminal domain (Helicase_C) // Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // PHD-finger (PHD) // Type III restriction enzyme, res subunit (ResIII) // Domain of Unknown Function (DUF1086) (DUF1086) // Domain of Unknown Function (DUF1087) (DUF1087) E. salsugineum v1.0 10394   scaffold_15: 5185917-5196310
Ciclev10010331m.g (1 of 2) PTHR10799:SF741 - HELICASE PROTEIN MOM1-RELATED C. clementina v1.0 14616   scaffold_1: 1183012-1197627
Lus10005339.g (1 of 3) PTHR10799:SF741 - HELICASE PROTEIN MOM1-RELATED L. usitatissimum v1.0 12100   scaffold21: 174002-186101
Lus10041019.g (1 of 3) PTHR10799:SF741 - HELICASE PROTEIN MOM1-RELATED L. usitatissimum v1.0 12117   scaffold280: 587648-599764
Gorai.001G036900 (1 of 3) PTHR10799:SF741 - HELICASE PROTEIN MOM1-RELATED G. raimondii v2.1 16361   Chr01: 3403877-3420237
Gorai.010G244100 (1 of 3) PTHR10799:SF741 - HELICASE PROTEIN MOM1-RELATED G. raimondii v2.1 13762   Chr10: 61318853-61332614
Thecc1EG036924 (1 of 2) K11643 - chromodomain-helicase-DNA-binding protein 4 (CHD4, MI2B) T. cacao v1.1 17137   scaffold_9: 911751-928887
Migut.A00006 (1 of 2) PTHR10799:SF741 - HELICASE PROTEIN MOM1-RELATED M. guttatus v2.0 14248   scaffold_1: 41631-55878
Araha.0387s0002 (1 of 1) PF00271//PF00385//PF00628//PF04851//PF06461//PF06465 - Helicase conserved C-terminal domain (Helicase_C) // Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // PHD-finger (PHD) // Type III restriction enzyme, res subunit (ResIII) // Domain of Unknown Function (DUF1086) (DUF1086) // Domain of Unknown Function (DUF1087) (DUF1087) A. halleri v1.1 10481   Scaffold387: 10056-20536
Cagra.2381s0021 (1 of 1) PF00271//PF00385//PF00628//PF04851//PF06461//PF06465 - Helicase conserved C-terminal domain (Helicase_C) // Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // PHD-finger (PHD) // Type III restriction enzyme, res subunit (ResIII) // Domain of Unknown Function (DUF1086) (DUF1086) // Domain of Unknown Function (DUF1087) (DUF1087) C. grandiflora v1.1 10114   Scaffold2381: 122820-132933
Glyma.06G063400 (1 of 4) PTHR10799:SF741 - HELICASE PROTEIN MOM1-RELATED G. max Wm82.a2.v1 18404   Chr06: 4793016-4811419
Glyma.04G062400 (1 of 4) PTHR10799:SF741 - HELICASE PROTEIN MOM1-RELATED G. max Wm82.a2.v1 21603   Chr04: 5134682-5156284
Brara.I04444 (1 of 1) PF00271//PF00385//PF00628//PF04851//PF06461//PF06465 - Helicase conserved C-terminal domain (Helicase_C) // Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // PHD-finger (PHD) // Type III restriction enzyme, res subunit (ResIII) // Domain of Unknown Function (DUF1086) (DUF1086) // Domain of Unknown Function (DUF1087) (DUF1087) B. rapa FPsc v1.3 8419   A09: 38624309-38632727
Bostr.26326s0154 (1 of 1) PF00271//PF00385//PF00628//PF04851//PF06461//PF06465 - Helicase conserved C-terminal domain (Helicase_C) // Chromo (CHRromatin Organisation MOdifier) domain (Chromo) // PHD-finger (PHD) // Type III restriction enzyme, res subunit (ResIII) // Domain of Unknown Function (DUF1086) (DUF1086) // Domain of Unknown Function (DUF1087) (DUF1087) B. stricta v1.2 9961   Scaffold26326: 1743888-1753848
Medtr3g106210 (1 of 2) PTHR10799:SF741 - HELICASE PROTEIN MOM1-RELATED M. truncatula Mt4.0v1 19107   chr3: 49033778-49052884
SapurV1A.0730s0070 (1 of 1) K11643 - chromodomain-helicase-DNA-binding protein 4 (CHD4, MI2B) S. purpurea v1.0 17337   chr06: 24734852-24752188
Eucgr.G00556 (1 of 2) PTHR10799:SF741 - HELICASE PROTEIN MOM1-RELATED E. grandis v2.0 22093   Chr07: 8264448-8286540
Prupe.1G391600 (1 of 2) PTHR10799:SF741 - HELICASE PROTEIN MOM1-RELATED P. persica v2.1 14449   Pp01: 34887015-34901463
Manes.03G010400 (1 of 3) PTHR10799:SF741 - HELICASE PROTEIN MOM1-RELATED M. esculenta v6.1 21076   Chromosome03: 853064-874139
Kalax.0205s0057 (1 of 6) PTHR10799:SF741 - HELICASE PROTEIN MOM1-RELATED K. laxiflora v1.1 13632   scaffold_205: 306287-319918
Kalax.0250s0033 (1 of 6) PTHR10799:SF741 - HELICASE PROTEIN MOM1-RELATED K. laxiflora v1.1 15234   scaffold_250: 310776-326009
Kalax.0530s0025 (1 of 6) PTHR10799:SF741 - HELICASE PROTEIN MOM1-RELATED K. laxiflora v1.1 15754   scaffold_530: 158510-174263
Aqcoe2G263100 (1 of 2) PTHR10799:SF741 - HELICASE PROTEIN MOM1-RELATED A. coerulea v3.1 21451   Chr_02: 32112119-32133569
Kaladp0058s0030 (1 of 3) K11643 - chromodomain-helicase-DNA-binding protein 4 (CHD4, MI2B) K. fedtschenkoi v1.1 15616   Scaffold_58: 160587-176202
AL4G16380 (1 of 1) K11643 - chromodomain-helicase-DNA-binding protein 4 (CHD4, MI2B) A. lyrata v2.1 10495   scaffold_4: 3822404-3832898
Tp57577_TGAC_v2_gene3131 (1 of 1) K11643 - chromodomain-helicase-DNA-binding protein 4 (CHD4, MI2B) T. pratense v2 24547   Tp57577_TGAC_v2_LG7: 11472145-11496691

49 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Cucsa.271650.1 C. sativus v1.0 122789120 chromatin remodeling factor CHD3 (PICKLE) 1 5272 Eudicot
AT2G25170.1 A. thaliana TAIR10 122789120 chromatin remodeling factor CHD3 (PICKLE) 1 5272 Eudicot
Thhalv10000014m E. salsugineum v1.0 122789120 chromatin remodeling factor CHD3 (PICKLE) 1 5272 Eudicot
Lus10005339 L. usitatissimum v1.0 122789120 chromatin remodeling factor CHD3 (PICKLE) 2 5272 Eudicot
Gorai.001G036900.1 G. raimondii v2.1 122789120 chromatin remodeling factor CHD3 (PICKLE) 2 5272 Eudicot
Thecc1EG036924t2 T. cacao v1.1 122789120 chromatin remodeling factor CHD3 (PICKLE) 1 5272 Eudicot
Migut.A00006.1.p M. guttatus v2.0 122789120 chromatin remodeling factor CHD3 (PICKLE) 1 5272 Eudicot
Glyma.04G062400.1.p G. max Wm82.a2.v1 122789120 chromatin remodeling factor CHD3 (PICKLE) 2 5272 Eudicot
Glyma.06G063400.1.p G. max Wm82.a2.v1 122789120 chromatin remodeling factor CHD3 (PICKLE) 2 5272 Eudicot
Brara.I04444.1.p B. rapa FPsc v1.3 122789120 chromatin remodeling factor CHD3 (PICKLE) 1 5272 Eudicot
Eucgr.G00556.1.p E. grandis v2.0 122789120 chromatin remodeling factor CHD3 (PICKLE) 1 5272 Eudicot
Prupe.1G391600.1.p P. persica v2.1 122789120 chromatin remodeling factor CHD3 (PICKLE) 1 5272 Eudicot
Kalax.0205s0057.1.p K. laxiflora v1.1 122789120 chromatin remodeling factor CHD3 (PICKLE) 3 5272 Eudicot
Kalax.0250s0033.1.p K. laxiflora v1.1 122789120 chromatin remodeling factor CHD3 (PICKLE) 3 5272 Eudicot
Kalax.0530s0025.1.p K. laxiflora v1.1 122789120 chromatin remodeling factor CHD3 (PICKLE) 3 5272 Eudicot
Aqcoe2G263100.1.p A. coerulea v3.1 122789120 chromatin remodeling factor CHD3 (PICKLE) 1 5272 Eudicot
Kaladp0058s0030.1.p K. fedtschenkoi v1.1 122789120 chromatin remodeling factor CHD3 (PICKLE) 1 5272 Eudicot
AL4G16380.t1 A. lyrata v2.1 122789120 chromatin remodeling factor CHD3 (PICKLE) 1 5272 Eudicot
Tp57577_TGAC_v2_mRNA3223 T. pratense v2 122789120 chromatin remodeling factor CHD3 (PICKLE) 1 5272 Eudicot
DCAR_007677 D. carota v2.0 122789120 chromatin remodeling factor CHD3 (PICKLE) 1 5272 Eudicot
Potri.006G262200.4.p P. trichocarpa v3.1 122789120 chromatin remodeling factor CHD3 (PICKLE) 2 5272 Eudicot
Podel.18G020900.1.p P. deltoides WV94 v2.1 122789120 chromatin remodeling factor CHD3 (PICKLE) 2 5272 Eudicot
Oeu056768.1 O. europaea v1.0 122789120 chromatin remodeling factor CHD3 (PICKLE) 2 5272 Eudicot
Oeu012636.1 O. europaea v1.0 122789120 chromatin remodeling factor CHD3 (PICKLE) 2 5272 Eudicot
VIT_204s0008g05880.1 V. vinifera v2.1 122789120 chromatin remodeling factor CHD3 (PICKLE) 1 5272 Eudicot
Lsat_1_v5_gn_1_42900.1 L. sativa V8 122789120 chromatin remodeling factor CHD3 (PICKLE) 1 5272 Eudicot
MD15G1037700 M. domestica v1.1 122789120 chromatin remodeling factor CHD3 (PICKLE) 2 5272 Eudicot
MD08G1058800 M. domestica v1.1 122789120 chromatin remodeling factor CHD3 (PICKLE) 2 5272 Eudicot
HanXRQChr01g0030671 H. annuus r1.2 122789120 chromatin remodeling factor CHD3 (PICKLE) 2 5272 Eudicot
29848.m004557 R. communis v0.1 122789120 chromatin remodeling factor CHD3 (PICKLE) 1 5272 Eudicot