Protein Family : light harvesting complex photosystem II 122044716

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  78

78 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29701.t000022 (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED R. communis v0.1 1664   29701: 179105-180768
Cucsa.067110 (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED C. sativus v1.0 1597   scaffold00696: 1520811-1522407
AT5G01530 (1 of 3) K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) A. thaliana TAIR10 LHCB4.1 1509   Chr5: 208937-210445
AT3G08940 (1 of 3) K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) A. thaliana TAIR10 LHCB4.2 1209   Chr3: 2717675-2718883
Thhalv10021263m.g (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED E. salsugineum v1.0 1592   scaffold_13: 6671097-6672688
Thhalv10014055m.g (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED E. salsugineum v1.0 1617   scaffold_2: 193819-195435
Ciclev10012370m.g (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED C. clementina v1.0 1830   scaffold_6: 16218093-16219922
Lus10035512.g (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED L. usitatissimum v1.0 1285   scaffold464: 50509-51793
Gorai.002G263900 (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED G. raimondii v2.1 1606   Chr02: 62433770-62435375
Thecc1EG021708 (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED T. cacao v1.1 1479   scaffold_5: 885060-886538
Migut.L02008 (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED M. guttatus v2.0 1224   scaffold_12: 26444296-26445519
Cagra.4082s0032 (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED C. grandiflora v1.1 1354   Scaffold4082: 124518-125871
Cagra.22463s0002 (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED C. grandiflora v1.1 1120   Scaffold22463: 742-1861
Glyma.01G115900 (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED G. max Wm82.a2.v1 2781   Chr01: 40072016-40074796
Glyma.03G060300 (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED G. max Wm82.a2.v1 2095   Chr03: 8759685-8761779
Brara.B00018 (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED B. rapa FPsc v1.3 1223   A02: 136690-137912
Brara.E03123 (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED B. rapa FPsc v1.3 1120   A05: 25698159-25699278
Bostr.6251s0120 (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED B. stricta v1.2 1429   Scaffold6251: 583063-584491
Bostr.22252s0178 (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED B. stricta v1.2 1156   Scaffold22252: 829715-830870
Medtr4g015570 (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED M. truncatula Mt4.0v1 2648   chr4: 4671256-4673903
SapurV1A.0001s0670 (1 of 3) K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) S. purpurea v1.0 1657   chr06: 7101309-7102965
SapurV1A.0431s0110 (1 of 3) K08915 - light-harvesting complex II chlorophyll a/b binding protein 4 (LHCB4) S. purpurea v1.0 1559   chr16: 8990212-8991770
evm_27.TU.AmTr_v1.0_scaffold00029.405 (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED A. trichopoda v1.0 4557   AmTr_v1.0_scaffold00029: 5491682-5496238
Traes_2BS_4AE914BE2 (1 of 7) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED T. aestivum v2.2 1995   ta_iwgsc_2bs_v1_5245974: 8901-10895
Eucgr.K02983 (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED E. grandis v2.0 1392   Chr11: 37288551-37289942
Prupe.6G276200 (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED P. persica v2.1 1586   Pp06: 25997046-25998631
GSMUA_Achr8G03720_001 (1 of 3) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED M. acuminata v1 1104   chr8: 2566701-2567804
GSMUA_Achr9G02810_001 (1 of 3) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED M. acuminata v1 1244   chr9: 1985940-1987183
Manes.08G091700 (1 of 1) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED M. esculenta v6.1 1192   Chromosome08: 23807139-23808330
Kalax.0190s0054 (1 of 2) PTHR21649:SF6 - CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC-RELATED K. laxiflora v1.1 1224   scaffold_190: 470558-471781

78 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29701.m000601 R. communis v0.1 122044716 light harvesting complex photosystem II 1 5273 Angiosperm
Cucsa.067110.1 C. sativus v1.0 122044716 light harvesting complex photosystem II 1 5273 Angiosperm
Thhalv10021263m E. salsugineum v1.0 122044716 light harvesting complex photosystem II 2 5273 Angiosperm
Thhalv10014055m E. salsugineum v1.0 122044716 light harvesting complex photosystem II 2 5273 Angiosperm
Lus10035512 L. usitatissimum v1.0 122044716 light harvesting complex photosystem II 1 5273 Angiosperm
Cagra.4082s0032.1.p C. grandiflora v1.1 122044716 light harvesting complex photosystem II 2 5273 Angiosperm
Cagra.22463s0002.1.p C. grandiflora v1.1 122044716 light harvesting complex photosystem II 2 5273 Angiosperm
Glyma.03G060300.1.p G. max Wm82.a2.v1 122044716 light harvesting complex photosystem II 2 5273 Angiosperm
Glyma.01G115900.1.p G. max Wm82.a2.v1 122044716 light harvesting complex photosystem II 2 5273 Angiosperm
Brara.B00018.1.p B. rapa FPsc v1.3 122044716 light harvesting complex photosystem II 2 5273 Angiosperm
Brara.E03123.1.p B. rapa FPsc v1.3 122044716 light harvesting complex photosystem II 2 5273 Angiosperm
Bostr.6251s0120.1.p B. stricta v1.2 122044716 light harvesting complex photosystem II 2 5273 Angiosperm
Medtr4g015570.1 M. truncatula Mt4.0v1 122044716 light harvesting complex photosystem II 1 5273 Angiosperm
SapurV1A.0001s0670.1.p S. purpurea v1.0 122044716 light harvesting complex photosystem II 2 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00029.405 A. trichopoda v1.0 122044716 light harvesting complex photosystem II 1 5273 Angiosperm
Traes_2BS_4AE914BE2.1 T. aestivum v2.2 122044716 light harvesting complex photosystem II 1 5273 Angiosperm
GSMUA_Achr9P02810_001 M. acuminata v1 122044716 light harvesting complex photosystem II 2 5273 Angiosperm
GSMUA_Achr8P03720_001 M. acuminata v1 122044716 light harvesting complex photosystem II 2 5273 Angiosperm
Manes.08G091700.1.p M. esculenta v6.1 122044716 light harvesting complex photosystem II 1 5273 Angiosperm
Kalax.0190s0054.1.p K. laxiflora v1.1 122044716 light harvesting complex photosystem II 2 5273 Angiosperm
Seita.2G351600.1.p S. italica v2.2 122044716 light harvesting complex photosystem II 1 5273 Angiosperm
Bradi1g24870.1.p B. distachyon v3.1 122044716 light harvesting complex photosystem II 1 5273 Angiosperm
Brast06G094500.1.p B. stacei v1.1 122044716 light harvesting complex photosystem II 1 5273 Angiosperm
Aco009130.1 A. comosus v3 122044716 light harvesting complex photosystem II 2 5273 Angiosperm
Aco009131.1 A. comosus v3 122044716 light harvesting complex photosystem II 2 5273 Angiosperm
Aqcoe2G097400.1.p A. coerulea v3.1 122044716 light harvesting complex photosystem II 1 5273 Angiosperm
LOC_Os07g37240.1 O. sativa v7.0 122044716 light harvesting complex photosystem II 1 5273 Angiosperm
Zosma137g00210.1 Z. marina v2.2 122044716 light harvesting complex photosystem II 1 5273 Angiosperm
AUR62041844-RA C. quinoa v1.0 122044716 light harvesting complex photosystem II 2 5273 Angiosperm
AUR62032349-RA C. quinoa v1.0 122044716 light harvesting complex photosystem II 2 5273 Angiosperm