Protein Family : retrotransposon protein, putative, SINE subclass, expressed 122051849

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  92

92 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30128.t000442 (1 of 1) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES // SUBFAMILY NOT NAMED R. communis v0.1 2850   30128: 1980299-1983148
orange1.1g010486m.g (1 of 1) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES C. sinensis v1.1 3860   scaffold00395: 54644-58503
Ciclev10011525m.g (1 of 1) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES C. clementina v1.0 4947   scaffold_6: 1334471-1339417
Gorai.004G235200 (1 of 2) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES G. raimondii v2.1 3280   Chr04: 57329689-57332968
Thecc1EG026840 (1 of 2) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES // SUBFAMILY NOT NAMED T. cacao v1.1 4269   scaffold_5: 40249558-40253826
Migut.B00882 (1 of 1) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES M. guttatus v2.0 3879   scaffold_2: 5742688-5746566
Cagra.10702s0009 (1 of 1) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES C. grandiflora v1.1 2440   Scaffold10702: 36810-39249
Glyma.10G143500 (1 of 5) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES G. max Wm82.a2.v1 5031   Chr10: 37803281-37808311
Glyma.03G228200 (1 of 1) PF03489//PF05184//PF14543 - Saposin-like type B, region 2 (SapB_2) // Saposin-like type B, region 1 (SapB_1) // Xylanase inhibitor N-terminal (TAXi_N) G. max Wm82.a2.v1 5065   Chr03: 43028333-43033397
Glyma.19G225500 (1 of 5) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES G. max Wm82.a2.v1 4884   Chr19: 47743727-47748610
Glyma.20G092000 (1 of 5) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES G. max Wm82.a2.v1 13366   Chr20: 33557741-33571106
Brara.I01618 (1 of 1) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES B. rapa FPsc v1.3 2854   A09: 10796026-10798879
Bostr.30057s0002 (1 of 1) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES B. stricta v1.2 3040   Scaffold30057: 15559-18598
Medtr1g484940 (1 of 2) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES M. truncatula Mt4.0v1 5009   chr1: 37816275-37821283
Medtr7g111530 (1 of 2) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES M. truncatula Mt4.0v1 4510   chr7: 45773404-45777913
SapurV1A.0442s0140 (1 of 3) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES // SUBFAMILY NOT NAMED S. purpurea v1.0 4254   chr13: 132962-137215
SapurV1A.1160s0010 (1 of 3) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES // SUBFAMILY NOT NAMED S. purpurea v1.0 4150   Scaffold1160: 766-4915
SapurV1A.1016s0100 (1 of 3) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES // SUBFAMILY NOT NAMED S. purpurea v1.0 4179   chr01: 13189659-13193837
evm_27.TU.AmTr_v1.0_scaffold00045.119 (1 of 2) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES A. trichopoda v1.0 6084   AmTr_v1.0_scaffold00045: 1628617-1634700
Traes_1AS_1A8023A17 (1 of 6) PTHR13683//PTHR13683:SF344 - ASPARTYL PROTEASES T. aestivum v2.2 4363   ta_iwgsc_1as_v1_3262127: 4552-8914
Traes_1DS_A477459F0 (1 of 6) PTHR13683//PTHR13683:SF344 - ASPARTYL PROTEASES T. aestivum v2.2 7497   ta_iwgsc_1ds_v1_1898615: 239-7735
Traes_7AL_D69B0DC0B (1 of 6) PTHR13683//PTHR13683:SF344 - ASPARTYL PROTEASES T. aestivum v2.2 4629   ta_iwgsc_7al_v1_4452302: 5961-10589
Traes_7BL_112FDC5EF (1 of 6) PTHR13683//PTHR13683:SF344 - ASPARTYL PROTEASES T. aestivum v2.2 3433   ta_iwgsc_7bl_v1_6635457: 1483-4915
Traes_7DL_5108C1694 (1 of 6) PTHR13683//PTHR13683:SF344 - ASPARTYL PROTEASES T. aestivum v2.2 3594   ta_iwgsc_7dl_v1_3319602: 13287-16880
Eucgr.B01820 (1 of 3) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES E. grandis v2.0 4451   Chr02: 28708279-28712729
Prupe.6G304600 (1 of 1) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES P. persica v2.1 4853   Pp06: 27543994-27548846
GSMUA_Achr1G25090_001 (1 of 3) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES M. acuminata v1 5941   chr1: 19508345-19514285
Manes.09G181200 (1 of 1) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES M. esculenta v6.1 3807   Chromosome09: 28897555-28901361
Kalax.0276s0002 (1 of 2) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES K. laxiflora v1.1 4069   scaffold_276: 21790-25858
Kalax.0084s0051 (1 of 2) PTHR13683//PTHR13683:SF312 - ASPARTYL PROTEASES K. laxiflora v1.1 3918   scaffold_84: 304671-308588

92 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Ciclev10011525m C. clementina v1.0 122051849 retrotransposon protein, putative, SINE subclass, expressed 1 5273 Angiosperm
Thecc1EG026840t1 T. cacao v1.1 122051849 retrotransposon protein, putative, SINE subclass, expressed 1 5273 Angiosperm
Cagra.10702s0009.1.p C. grandiflora v1.1 122051849 retrotransposon protein, putative, SINE subclass, expressed 1 5273 Angiosperm
Glyma.19G225500.1.p G. max Wm82.a2.v1 122051849 retrotransposon protein, putative, SINE subclass, expressed 4 5273 Angiosperm
Glyma.03G228200.1.p G. max Wm82.a2.v1 122051849 retrotransposon protein, putative, SINE subclass, expressed 4 5273 Angiosperm
Glyma.20G092000.1.p G. max Wm82.a2.v1 122051849 retrotransposon protein, putative, SINE subclass, expressed 4 5273 Angiosperm
Medtr7g111530.3 M. truncatula Mt4.0v1 122051849 retrotransposon protein, putative, SINE subclass, expressed 2 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00045.119 A. trichopoda v1.0 122051849 retrotransposon protein, putative, SINE subclass, expressed 1 5273 Angiosperm
Traes_1AS_1A8023A17.1 T. aestivum v2.2 122051849 retrotransposon protein, putative, SINE subclass, expressed 5 5273 Angiosperm
Traes_1DS_A477459F0.2 T. aestivum v2.2 122051849 retrotransposon protein, putative, SINE subclass, expressed 5 5273 Angiosperm
Traes_7BL_112FDC5EF.3 T. aestivum v2.2 122051849 retrotransposon protein, putative, SINE subclass, expressed 5 5273 Angiosperm
Traes_7DL_5108C1694.1 T. aestivum v2.2 122051849 retrotransposon protein, putative, SINE subclass, expressed 5 5273 Angiosperm
Traes_7AL_D69B0DC0B.1 T. aestivum v2.2 122051849 retrotransposon protein, putative, SINE subclass, expressed 5 5273 Angiosperm
GSMUA_Achr1P25090_001 M. acuminata v1 122051849 retrotransposon protein, putative, SINE subclass, expressed 1 5273 Angiosperm
Manes.09G181200.1.p M. esculenta v6.1 122051849 retrotransposon protein, putative, SINE subclass, expressed 1 5273 Angiosperm
Kalax.0084s0051.1.p K. laxiflora v1.1 122051849 retrotransposon protein, putative, SINE subclass, expressed 2 5273 Angiosperm
Kalax.0276s0002.1.p K. laxiflora v1.1 122051849 retrotransposon protein, putative, SINE subclass, expressed 2 5273 Angiosperm
Seita.5G032300.1.p S. italica v2.2 122051849 retrotransposon protein, putative, SINE subclass, expressed 2 5273 Angiosperm
Seita.3G054400.1.p S. italica v2.2 122051849 retrotransposon protein, putative, SINE subclass, expressed 2 5273 Angiosperm
Bradi2g36862.1.p B. distachyon v3.1 122051849 retrotransposon protein, putative, SINE subclass, expressed 2 5273 Angiosperm
Bradi2g11190.1.p B. distachyon v3.1 122051849 retrotransposon protein, putative, SINE subclass, expressed 2 5273 Angiosperm
Brast08G217500.1.p B. stacei v1.1 122051849 retrotransposon protein, putative, SINE subclass, expressed 2 5273 Angiosperm
Brast01G288300.1.p B. stacei v1.1 122051849 retrotransposon protein, putative, SINE subclass, expressed 2 5273 Angiosperm
Aco017185.1 A. comosus v3 122051849 retrotransposon protein, putative, SINE subclass, expressed 1 5273 Angiosperm
Aqcoe2G246500.1.p A. coerulea v3.1 122051849 retrotransposon protein, putative, SINE subclass, expressed 1 5273 Angiosperm
LOC_Os01g18630.1 O. sativa v7.0 122051849 retrotransposon protein, putative, SINE subclass, expressed 2 5273 Angiosperm
LOC_Os05g04630.5 O. sativa v7.0 122051849 retrotransposon protein, putative, SINE subclass, expressed 2 5273 Angiosperm
Zosma56g01480.1 Z. marina v2.2 122051849 retrotransposon protein, putative, SINE subclass, expressed 1 5273 Angiosperm
Tp57577_TGAC_v2_mRNA1645 T. pratense v2 122051849 retrotransposon protein, putative, SINE subclass, expressed 2 5273 Angiosperm
DCAR_001889 D. carota v2.0 122051849 retrotransposon protein, putative, SINE subclass, expressed 3 5273 Angiosperm