Gene : 27543.t000006 R. communis v0.1
Defline:  (1 of 1) PTHR11777//PTHR11777:SF18 - ALANYL-TRNA SYNTHETASE // ALANINE--TRNA LIGASE, CYTOPLASMIC Genomic Order:  6
Name:  ? 27543.t000006 Secondary Identifier:  ? PAC:16798660
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis TRNA-CHARGING-PWY Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
27543.t000006 0.5kb upstream 0.5kb upstream 14056 true 27543: 143305-157360 Ricinus communis
27543.t000006 0.5kb upstream 0.5kb upstream 500 false 27543: 143305-143804 Ricinus communis
27543.t000006 0.5kb downstream 0.5kb downstream 14056 true 27543: 143805-157860 Ricinus communis
27543.t000006 0.5kb downstream 0.5kb downstream 500 false 27543: 157361-157860 Ricinus communis
27543.t000006 1.0kb upstream 1.0kb upstream 14556 true 27543: 142805-157360 Ricinus communis
27543.t000006 1.0kb upstream 1.0kb upstream 1000 false 27543: 142805-143804 Ricinus communis
27543.t000006 1.0kb downstream 1.0kb downstream 14556 true 27543: 143805-158360 Ricinus communis
27543.t000006 1.0kb downstream 1.0kb downstream 1000 false 27543: 157361-158360 Ricinus communis
27543.t000006 2.0kb upstream 2.0kb upstream 15556 true 27543: 141805-157360 Ricinus communis
27543.t000006 2.0kb upstream 2.0kb upstream 2000 false 27543: 141805-143804 Ricinus communis
27543.t000006 2.0kb downstream 2.0kb downstream 15556 true 27543: 143805-159360 Ricinus communis
27543.t000006 2.0kb downstream 2.0kb downstream 2000 false 27543: 157361-159360 Ricinus communis
27543.t000006 5.0kb upstream 5.0kb upstream 18556 true 27543: 138805-157360 Ricinus communis
27543.t000006 5.0kb upstream 5.0kb upstream 5000 false 27543: 138805-143804 Ricinus communis
27543.t000006 5.0kb downstream 5.0kb downstream 17014 true 27543: 143805-160818 Ricinus communis
27543.t000006 5.0kb downstream 5.0kb downstream 3458 false 27543: 157361-160818 Ricinus communis
27543.t000006 10.0kb upstream 10.0kb upstream 23556 true 27543: 133805-157360 Ricinus communis
27543.t000006 10.0kb upstream 10.0kb upstream 10000 false 27543: 133805-143804 Ricinus communis
27543.t000006 10.0kb downstream 10.0kb downstream 17014 true 27543: 143805-160818 Ricinus communis
27543.t000006 10.0kb downstream 10.0kb downstream 3458 false 27543: 157361-160818 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452059 5262 Malpighiales View MSA
124240298 5268 Malvidae View MSA
124063784 5270 Rosid View MSA
123740226 5271 Pentapetalae View MSA
122791486 5272 Eudicot View MSA
122047019 5273 Angiosperm View MSA
121346985 5274 Embryophyte View MSA
123424131 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain