Gene : 29652.t000005 R. communis v0.1
Defline:  (1 of 8) K02703 - photosystem II P680 reaction center D1 protein (psbA) Genomic Order:  5
Name:  ? 29652.t000005 Secondary Identifier:  ? PAC:16804896
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PHOTOALL-PWY Ricinus communis pathologic  
Rcommunis PWY-101 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29652.t000005 0.5kb upstream 0.5kb upstream 1581 true 29652: 382255-383835 Ricinus communis
29652.t000005 0.5kb upstream 0.5kb upstream 500 false 29652: 383336-383835 Ricinus communis
29652.t000005 0.5kb downstream 0.5kb downstream 1581 true 29652: 381755-383335 Ricinus communis
29652.t000005 0.5kb downstream 0.5kb downstream 500 false 29652: 381755-382254 Ricinus communis
29652.t000005 1.0kb upstream 1.0kb upstream 2081 true 29652: 382255-384335 Ricinus communis
29652.t000005 1.0kb upstream 1.0kb upstream 1000 false 29652: 383336-384335 Ricinus communis
29652.t000005 1.0kb downstream 1.0kb downstream 2081 true 29652: 381255-383335 Ricinus communis
29652.t000005 1.0kb downstream 1.0kb downstream 1000 false 29652: 381255-382254 Ricinus communis
29652.t000005 2.0kb upstream 2.0kb upstream 3081 true 29652: 382255-385335 Ricinus communis
29652.t000005 2.0kb upstream 2.0kb upstream 2000 false 29652: 383336-385335 Ricinus communis
29652.t000005 2.0kb downstream 2.0kb downstream 3081 true 29652: 380255-383335 Ricinus communis
29652.t000005 2.0kb downstream 2.0kb downstream 2000 false 29652: 380255-382254 Ricinus communis
29652.t000005 5.0kb upstream 5.0kb upstream 6081 true 29652: 382255-388335 Ricinus communis
29652.t000005 5.0kb upstream 5.0kb upstream 5000 false 29652: 383336-388335 Ricinus communis
29652.t000005 5.0kb downstream 5.0kb downstream 6081 true 29652: 377255-383335 Ricinus communis
29652.t000005 5.0kb downstream 5.0kb downstream 5000 false 29652: 377255-382254 Ricinus communis
29652.t000005 10.0kb upstream 10.0kb upstream 11081 true 29652: 382255-393335 Ricinus communis
29652.t000005 10.0kb upstream 10.0kb upstream 10000 false 29652: 383336-393335 Ricinus communis
29652.t000005 10.0kb downstream 10.0kb downstream 11081 true 29652: 372255-383335 Ricinus communis
29652.t000005 10.0kb downstream 10.0kb downstream 10000 false 29652: 372255-382254 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122438046 5262 Malpighiales Singleton cluster - no MSA
124226544 5268 Malvidae Singleton cluster - no MSA
123942666 5270 Rosid Singleton cluster - no MSA
123753555 5271 Pentapetalae View MSA
122797414 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain