Gene : 30167.t000003 R. communis v0.1
Defline:  (1 of 22) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) Genomic Order:  3
Name:  ? 30167.t000003 Secondary Identifier:  ? PAC:16820987
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
30167.t000003 0.5kb upstream 0.5kb upstream 831 true 30167: 127178-128008 Ricinus communis
30167.t000003 0.5kb upstream 0.5kb upstream 500 false 30167: 127178-127677 Ricinus communis
30167.t000003 0.5kb downstream 0.5kb downstream 831 true 30167: 127678-128508 Ricinus communis
30167.t000003 0.5kb downstream 0.5kb downstream 500 false 30167: 128009-128508 Ricinus communis
30167.t000003 1.0kb upstream 1.0kb upstream 1331 true 30167: 126678-128008 Ricinus communis
30167.t000003 1.0kb upstream 1.0kb upstream 1000 false 30167: 126678-127677 Ricinus communis
30167.t000003 1.0kb downstream 1.0kb downstream 1331 true 30167: 127678-129008 Ricinus communis
30167.t000003 1.0kb downstream 1.0kb downstream 1000 false 30167: 128009-129008 Ricinus communis
30167.t000003 2.0kb upstream 2.0kb upstream 2331 true 30167: 125678-128008 Ricinus communis
30167.t000003 2.0kb upstream 2.0kb upstream 2000 false 30167: 125678-127677 Ricinus communis
30167.t000003 2.0kb downstream 2.0kb downstream 2331 true 30167: 127678-130008 Ricinus communis
30167.t000003 2.0kb downstream 2.0kb downstream 2000 false 30167: 128009-130008 Ricinus communis
30167.t000003 5.0kb upstream 5.0kb upstream 5331 true 30167: 122678-128008 Ricinus communis
30167.t000003 5.0kb upstream 5.0kb upstream 5000 false 30167: 122678-127677 Ricinus communis
30167.t000003 5.0kb downstream 5.0kb downstream 5331 true 30167: 127678-133008 Ricinus communis
30167.t000003 5.0kb downstream 5.0kb downstream 5000 false 30167: 128009-133008 Ricinus communis
30167.t000003 10.0kb upstream 10.0kb upstream 10331 true 30167: 117678-128008 Ricinus communis
30167.t000003 10.0kb upstream 10.0kb upstream 10000 false 30167: 117678-127677 Ricinus communis
30167.t000003 10.0kb downstream 10.0kb downstream 10331 true 30167: 127678-138008 Ricinus communis
30167.t000003 10.0kb downstream 10.0kb downstream 10000 false 30167: 128009-138008 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121579310 5273 Angiosperm View MSA
122442315 5262 Malpighiales Singleton cluster - no MSA
124249140 5268 Malvidae View MSA
123952332 5270 Rosid View MSA
123530156 5271 Pentapetalae View MSA
122565128 5272 Eudicot View MSA
120851774 5274 Embryophyte View MSA
122892941 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain