Gene : 30078.t000083 R. communis v0.1
Defline:  (1 of 1) PTHR11476//PTHR11476:SF5 - HISTIDYL-TRNA SYNTHETASE // CLASS II AARS AND BIOTIN SYNTHETASES SUPERFAMILY PROTEIN-RELATED Genomic Order:  81
Name:  ? 30078.t000083 Secondary Identifier:  ? PAC:16817401
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis TRNA-CHARGING-PWY Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
30078.t000083 0.5kb upstream 0.5kb upstream 5079 true 30078: 523461-528539 Ricinus communis
30078.t000083 0.5kb upstream 0.5kb upstream 500 false 30078: 528040-528539 Ricinus communis
30078.t000083 0.5kb downstream 0.5kb downstream 5079 true 30078: 522961-528039 Ricinus communis
30078.t000083 0.5kb downstream 0.5kb downstream 500 false 30078: 522961-523460 Ricinus communis
30078.t000083 1.0kb upstream 1.0kb upstream 5579 true 30078: 523461-529039 Ricinus communis
30078.t000083 1.0kb upstream 1.0kb upstream 1000 false 30078: 528040-529039 Ricinus communis
30078.t000083 1.0kb downstream 1.0kb downstream 5579 true 30078: 522461-528039 Ricinus communis
30078.t000083 1.0kb downstream 1.0kb downstream 1000 false 30078: 522461-523460 Ricinus communis
30078.t000083 2.0kb upstream 2.0kb upstream 6579 true 30078: 523461-530039 Ricinus communis
30078.t000083 2.0kb upstream 2.0kb upstream 2000 false 30078: 528040-530039 Ricinus communis
30078.t000083 2.0kb downstream 2.0kb downstream 6579 true 30078: 521461-528039 Ricinus communis
30078.t000083 2.0kb downstream 2.0kb downstream 2000 false 30078: 521461-523460 Ricinus communis
30078.t000083 5.0kb upstream 5.0kb upstream 9579 true 30078: 523461-533039 Ricinus communis
30078.t000083 5.0kb upstream 5.0kb upstream 5000 false 30078: 528040-533039 Ricinus communis
30078.t000083 5.0kb downstream 5.0kb downstream 9579 true 30078: 518461-528039 Ricinus communis
30078.t000083 5.0kb downstream 5.0kb downstream 5000 false 30078: 518461-523460 Ricinus communis
30078.t000083 10.0kb upstream 10.0kb upstream 14579 true 30078: 523461-538039 Ricinus communis
30078.t000083 10.0kb upstream 10.0kb upstream 10000 false 30078: 528040-538039 Ricinus communis
30078.t000083 10.0kb downstream 10.0kb downstream 14579 true 30078: 513461-528039 Ricinus communis
30078.t000083 10.0kb downstream 10.0kb downstream 10000 false 30078: 513461-523460 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458189 5262 Malpighiales View MSA
124242032 5268 Malvidae View MSA
124069172 5270 Rosid View MSA
123739559 5271 Pentapetalae View MSA
122792579 5272 Eudicot View MSA
122042038 5273 Angiosperm View MSA
121344697 5274 Embryophyte View MSA
123424484 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain