Gene : 29912.t000143 R. communis v0.1
Defline:  (1 of 2) PTHR22594:SF34 - ASPARAGINE--TRNA LIGASE, MITOCHONDRIAL-RELATED Genomic Order:  116
Name:  ? 29912.t000143 Secondary Identifier:  ? PAC:16813294
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis TRNA-CHARGING-PWY Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29912.t000143 0.5kb upstream 0.5kb upstream 2195 true 29912: 723294-725488 Ricinus communis
29912.t000143 0.5kb upstream 0.5kb upstream 500 false 29912: 724989-725488 Ricinus communis
29912.t000143 0.5kb downstream 0.5kb downstream 2195 true 29912: 722794-724988 Ricinus communis
29912.t000143 0.5kb downstream 0.5kb downstream 500 false 29912: 722794-723293 Ricinus communis
29912.t000143 1.0kb upstream 1.0kb upstream 2695 true 29912: 723294-725988 Ricinus communis
29912.t000143 1.0kb upstream 1.0kb upstream 1000 false 29912: 724989-725988 Ricinus communis
29912.t000143 1.0kb downstream 1.0kb downstream 2695 true 29912: 722294-724988 Ricinus communis
29912.t000143 1.0kb downstream 1.0kb downstream 1000 false 29912: 722294-723293 Ricinus communis
29912.t000143 2.0kb upstream 2.0kb upstream 3695 true 29912: 723294-726988 Ricinus communis
29912.t000143 2.0kb upstream 2.0kb upstream 2000 false 29912: 724989-726988 Ricinus communis
29912.t000143 2.0kb downstream 2.0kb downstream 3695 true 29912: 721294-724988 Ricinus communis
29912.t000143 2.0kb downstream 2.0kb downstream 2000 false 29912: 721294-723293 Ricinus communis
29912.t000143 5.0kb upstream 5.0kb upstream 6695 true 29912: 723294-729988 Ricinus communis
29912.t000143 5.0kb upstream 5.0kb upstream 5000 false 29912: 724989-729988 Ricinus communis
29912.t000143 5.0kb downstream 5.0kb downstream 6695 true 29912: 718294-724988 Ricinus communis
29912.t000143 5.0kb downstream 5.0kb downstream 5000 false 29912: 718294-723293 Ricinus communis
29912.t000143 10.0kb upstream 10.0kb upstream 11695 true 29912: 723294-734988 Ricinus communis
29912.t000143 10.0kb upstream 10.0kb upstream 10000 false 29912: 724989-734988 Ricinus communis
29912.t000143 10.0kb downstream 10.0kb downstream 11695 true 29912: 713294-724988 Ricinus communis
29912.t000143 10.0kb downstream 10.0kb downstream 10000 false 29912: 713294-723293 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460421 5262 Malpighiales View MSA
124236566 5268 Malvidae View MSA
124074884 5270 Rosid View MSA
123628693 5271 Pentapetalae View MSA
122797951 5272 Eudicot View MSA
122046653 5273 Angiosperm View MSA
121347407 5274 Embryophyte View MSA
123425305 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain