Gene : 29900.t000060 R. communis v0.1
Defline:  (1 of 7) PTHR31828:SF1 - PHOSPHOLIPASE A1-IIALPHA-RELATED Genomic Order:  58
Name:  ? 29900.t000060 Secondary Identifier:  ? PAC:16812476
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis LIPASYN-PWY Ricinus communis pathologic  
Rcommunis PWY-6803 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29900.t000060 0.5kb upstream 0.5kb upstream 2318 true 29900: 371662-373979 Ricinus communis
29900.t000060 0.5kb upstream 0.5kb upstream 500 false 29900: 373480-373979 Ricinus communis
29900.t000060 0.5kb downstream 0.5kb downstream 2318 true 29900: 371162-373479 Ricinus communis
29900.t000060 0.5kb downstream 0.5kb downstream 500 false 29900: 371162-371661 Ricinus communis
29900.t000060 1.0kb upstream 1.0kb upstream 2818 true 29900: 371662-374479 Ricinus communis
29900.t000060 1.0kb upstream 1.0kb upstream 1000 false 29900: 373480-374479 Ricinus communis
29900.t000060 1.0kb downstream 1.0kb downstream 2818 true 29900: 370662-373479 Ricinus communis
29900.t000060 1.0kb downstream 1.0kb downstream 1000 false 29900: 370662-371661 Ricinus communis
29900.t000060 2.0kb upstream 2.0kb upstream 3818 true 29900: 371662-375479 Ricinus communis
29900.t000060 2.0kb upstream 2.0kb upstream 2000 false 29900: 373480-375479 Ricinus communis
29900.t000060 2.0kb downstream 2.0kb downstream 3818 true 29900: 369662-373479 Ricinus communis
29900.t000060 2.0kb downstream 2.0kb downstream 2000 false 29900: 369662-371661 Ricinus communis
29900.t000060 5.0kb upstream 5.0kb upstream 6818 true 29900: 371662-378479 Ricinus communis
29900.t000060 5.0kb upstream 5.0kb upstream 5000 false 29900: 373480-378479 Ricinus communis
29900.t000060 5.0kb downstream 5.0kb downstream 6818 true 29900: 366662-373479 Ricinus communis
29900.t000060 5.0kb downstream 5.0kb downstream 5000 false 29900: 366662-371661 Ricinus communis
29900.t000060 10.0kb upstream 10.0kb upstream 11818 true 29900: 371662-383479 Ricinus communis
29900.t000060 10.0kb upstream 10.0kb upstream 10000 false 29900: 373480-383479 Ricinus communis
29900.t000060 10.0kb downstream 10.0kb downstream 11818 true 29900: 361662-373479 Ricinus communis
29900.t000060 10.0kb downstream 10.0kb downstream 10000 false 29900: 361662-371661 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456503 5262 Malpighiales View MSA
124244180 5268 Malvidae View MSA
124063184 5270 Rosid View MSA
123736780 5271 Pentapetalae View MSA
122790927 5272 Eudicot View MSA
122045571 5273 Angiosperm View MSA
121310467 5274 Embryophyte View MSA
123428676 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain