Gene : 29701.t000008 R. communis v0.1
Defline:  (1 of 3) K06215 - pyridoxal 5'-phosphate synthase pdxS subunit (pdxS, pdx1) Genomic Order:  8
Name:  ? 29701.t000008 Secondary Identifier:  ? PAC:16806119
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis CITRULBIO-PWY Ricinus communis pathologic  
Rcommunis GLUTAMINDEG-PWY Ricinus communis pathologic  
Rcommunis PWY-6466 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29701.t000008 0.5kb upstream 0.5kb upstream 1705 true 29701: 46519-48223 Ricinus communis
29701.t000008 0.5kb upstream 0.5kb upstream 500 false 29701: 47724-48223 Ricinus communis
29701.t000008 0.5kb downstream 0.5kb downstream 1705 true 29701: 46019-47723 Ricinus communis
29701.t000008 0.5kb downstream 0.5kb downstream 500 false 29701: 46019-46518 Ricinus communis
29701.t000008 1.0kb upstream 1.0kb upstream 2205 true 29701: 46519-48723 Ricinus communis
29701.t000008 1.0kb upstream 1.0kb upstream 1000 false 29701: 47724-48723 Ricinus communis
29701.t000008 1.0kb downstream 1.0kb downstream 2205 true 29701: 45519-47723 Ricinus communis
29701.t000008 1.0kb downstream 1.0kb downstream 1000 false 29701: 45519-46518 Ricinus communis
29701.t000008 2.0kb upstream 2.0kb upstream 3205 true 29701: 46519-49723 Ricinus communis
29701.t000008 2.0kb upstream 2.0kb upstream 2000 false 29701: 47724-49723 Ricinus communis
29701.t000008 2.0kb downstream 2.0kb downstream 3205 true 29701: 44519-47723 Ricinus communis
29701.t000008 2.0kb downstream 2.0kb downstream 2000 false 29701: 44519-46518 Ricinus communis
29701.t000008 5.0kb upstream 5.0kb upstream 6205 true 29701: 46519-52723 Ricinus communis
29701.t000008 5.0kb upstream 5.0kb upstream 5000 false 29701: 47724-52723 Ricinus communis
29701.t000008 5.0kb downstream 5.0kb downstream 6205 true 29701: 41519-47723 Ricinus communis
29701.t000008 5.0kb downstream 5.0kb downstream 5000 false 29701: 41519-46518 Ricinus communis
29701.t000008 10.0kb upstream 10.0kb upstream 11205 true 29701: 46519-57723 Ricinus communis
29701.t000008 10.0kb upstream 10.0kb upstream 10000 false 29701: 47724-57723 Ricinus communis
29701.t000008 10.0kb downstream 10.0kb downstream 11205 true 29701: 36519-47723 Ricinus communis
29701.t000008 10.0kb downstream 10.0kb downstream 10000 false 29701: 36519-46518 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464489 5262 Malpighiales View MSA
124254275 5268 Malvidae View MSA
124060508 5270 Rosid View MSA
123743959 5271 Pentapetalae View MSA
122794902 5272 Eudicot View MSA
122045633 5273 Angiosperm View MSA
121345319 5274 Embryophyte View MSA
123425951 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain