Gene : Thecc1EG042079 T. cacao v1.1

Defline:  (1 of 2) PTHR31223//PTHR31223:SF17 - FAMILY NOT NAMED // CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG3-RELATED Genomic Order:  3366
Name:  ? Thecc1EG042079 Secondary Identifier:  ? PAC:27427011

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG042079 0.5kb upstream 0.5kb upstream 4797 true scaffold_9: 40900826-40905622 Theobroma cacao
Thecc1EG042079 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 40905123-40905622 Theobroma cacao
Thecc1EG042079 0.5kb downstream 0.5kb downstream 4797 true scaffold_9: 40900326-40905122 Theobroma cacao
Thecc1EG042079 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 40900326-40900825 Theobroma cacao
Thecc1EG042079 1.0kb upstream 1.0kb upstream 5297 true scaffold_9: 40900826-40906122 Theobroma cacao
Thecc1EG042079 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 40905123-40906122 Theobroma cacao
Thecc1EG042079 1.0kb downstream 1.0kb downstream 5297 true scaffold_9: 40899826-40905122 Theobroma cacao
Thecc1EG042079 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 40899826-40900825 Theobroma cacao
Thecc1EG042079 2.0kb upstream 2.0kb upstream 6297 true scaffold_9: 40900826-40907122 Theobroma cacao
Thecc1EG042079 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 40905123-40907122 Theobroma cacao
Thecc1EG042079 2.0kb downstream 2.0kb downstream 6297 true scaffold_9: 40898826-40905122 Theobroma cacao
Thecc1EG042079 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 40898826-40900825 Theobroma cacao
Thecc1EG042079 5.0kb upstream 5.0kb upstream 9297 true scaffold_9: 40900826-40910122 Theobroma cacao
Thecc1EG042079 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 40905123-40910122 Theobroma cacao
Thecc1EG042079 5.0kb downstream 5.0kb downstream 9297 true scaffold_9: 40895826-40905122 Theobroma cacao
Thecc1EG042079 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 40895826-40900825 Theobroma cacao
Thecc1EG042079 10.0kb upstream 10.0kb upstream 14297 true scaffold_9: 40900826-40915122 Theobroma cacao
Thecc1EG042079 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 40905123-40915122 Theobroma cacao
Thecc1EG042079 10.0kb downstream 10.0kb downstream 14297 true scaffold_9: 40890826-40905122 Theobroma cacao
Thecc1EG042079 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 40890826-40900825 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835443 5264 Brassicales-Malvales View MSA
124344866 5266 SBM View MSA
124250636 5268 Malvidae View MSA
124062112 5270 Rosid View MSA
123753527 5271 Pentapetalae View MSA
122796499 5272 Eudicot View MSA
122046742 5273 Angiosperm View MSA
121351757 5274 Embryophyte View MSA
123427506 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain