Gene : Thecc1EG041186 T. cacao v1.1
Defline:  (1 of 1) PTHR22763//PTHR22763:SF47 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2637
Name:  ? Thecc1EG041186 Secondary Identifier:  ? PAC:27425989
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG041186 0.5kb upstream 0.5kb upstream 7335 true scaffold_9: 36035516-36042850 Theobroma cacao
Thecc1EG041186 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 36042351-36042850 Theobroma cacao
Thecc1EG041186 0.5kb downstream 0.5kb downstream 7335 true scaffold_9: 36035016-36042350 Theobroma cacao
Thecc1EG041186 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 36035016-36035515 Theobroma cacao
Thecc1EG041186 1.0kb upstream 1.0kb upstream 7835 true scaffold_9: 36035516-36043350 Theobroma cacao
Thecc1EG041186 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 36042351-36043350 Theobroma cacao
Thecc1EG041186 1.0kb downstream 1.0kb downstream 7835 true scaffold_9: 36034516-36042350 Theobroma cacao
Thecc1EG041186 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 36034516-36035515 Theobroma cacao
Thecc1EG041186 2.0kb upstream 2.0kb upstream 8835 true scaffold_9: 36035516-36044350 Theobroma cacao
Thecc1EG041186 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 36042351-36044350 Theobroma cacao
Thecc1EG041186 2.0kb downstream 2.0kb downstream 8835 true scaffold_9: 36033516-36042350 Theobroma cacao
Thecc1EG041186 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 36033516-36035515 Theobroma cacao
Thecc1EG041186 5.0kb upstream 5.0kb upstream 11835 true scaffold_9: 36035516-36047350 Theobroma cacao
Thecc1EG041186 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 36042351-36047350 Theobroma cacao
Thecc1EG041186 5.0kb downstream 5.0kb downstream 11835 true scaffold_9: 36030516-36042350 Theobroma cacao
Thecc1EG041186 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 36030516-36035515 Theobroma cacao
Thecc1EG041186 10.0kb upstream 10.0kb upstream 16835 true scaffold_9: 36035516-36052350 Theobroma cacao
Thecc1EG041186 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 36042351-36052350 Theobroma cacao
Thecc1EG041186 10.0kb downstream 10.0kb downstream 16835 true scaffold_9: 36025516-36042350 Theobroma cacao
Thecc1EG041186 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 36025516-36035515 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840483 5264 Brassicales-Malvales View MSA
124339888 5266 SBM View MSA
124253018 5268 Malvidae View MSA
124072102 5270 Rosid View MSA
123744750 5271 Pentapetalae View MSA
122788933 5272 Eudicot View MSA
122041616 5273 Angiosperm View MSA
121350334 5274 Embryophyte View MSA
123381683 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain