Gene : Thecc1EG040842 T. cacao v1.1
Defline:  (1 of 1) K11367 - chromodomain-helicase-DNA-binding protein 1 [EC:3.6.4.12] (CHD1) Genomic Order:  2404
Name:  ? Thecc1EG040842 Secondary Identifier:  ? PAC:27431095
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040842 0.5kb upstream 0.5kb upstream 19953 true scaffold_9: 33872176-33892128 Theobroma cacao
Thecc1EG040842 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 33872176-33872675 Theobroma cacao
Thecc1EG040842 0.5kb downstream 0.5kb downstream 19953 true scaffold_9: 33872676-33892628 Theobroma cacao
Thecc1EG040842 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 33892129-33892628 Theobroma cacao
Thecc1EG040842 1.0kb upstream 1.0kb upstream 20453 true scaffold_9: 33871676-33892128 Theobroma cacao
Thecc1EG040842 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 33871676-33872675 Theobroma cacao
Thecc1EG040842 1.0kb downstream 1.0kb downstream 20453 true scaffold_9: 33872676-33893128 Theobroma cacao
Thecc1EG040842 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 33892129-33893128 Theobroma cacao
Thecc1EG040842 2.0kb upstream 2.0kb upstream 21453 true scaffold_9: 33870676-33892128 Theobroma cacao
Thecc1EG040842 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 33870676-33872675 Theobroma cacao
Thecc1EG040842 2.0kb downstream 2.0kb downstream 21453 true scaffold_9: 33872676-33894128 Theobroma cacao
Thecc1EG040842 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 33892129-33894128 Theobroma cacao
Thecc1EG040842 5.0kb upstream 5.0kb upstream 24453 true scaffold_9: 33867676-33892128 Theobroma cacao
Thecc1EG040842 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 33867676-33872675 Theobroma cacao
Thecc1EG040842 5.0kb downstream 5.0kb downstream 24453 true scaffold_9: 33872676-33897128 Theobroma cacao
Thecc1EG040842 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 33892129-33897128 Theobroma cacao
Thecc1EG040842 10.0kb upstream 10.0kb upstream 29453 true scaffold_9: 33862676-33892128 Theobroma cacao
Thecc1EG040842 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 33862676-33872675 Theobroma cacao
Thecc1EG040842 10.0kb downstream 10.0kb downstream 29453 true scaffold_9: 33872676-33902128 Theobroma cacao
Thecc1EG040842 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 33892129-33902128 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833414 5264 Brassicales-Malvales View MSA
124338527 5266 SBM View MSA
124244084 5268 Malvidae View MSA
124061763 5270 Rosid View MSA
123752228 5271 Pentapetalae View MSA
122786822 5272 Eudicot View MSA
122051163 5273 Angiosperm View MSA
121347605 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain