Gene : Thecc1EG040327 T. cacao v1.1
Defline:  (1 of 2) PTHR31388:SF28 - PEROXIDASE 58 Genomic Order:  2131
Name:  ? Thecc1EG040327 Secondary Identifier:  ? PAC:27430391
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5466 Theobroma cacao pathologic  
Tcacao PWY-6824 Theobroma cacao pathologic  
Tcacao PWY-7214 Theobroma cacao pathologic  
Tcacao PWY-7445 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040327 0.5kb upstream 0.5kb upstream 2211 true scaffold_9: 28981897-28984107 Theobroma cacao
Thecc1EG040327 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 28983608-28984107 Theobroma cacao
Thecc1EG040327 0.5kb downstream 0.5kb downstream 2211 true scaffold_9: 28981397-28983607 Theobroma cacao
Thecc1EG040327 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 28981397-28981896 Theobroma cacao
Thecc1EG040327 1.0kb upstream 1.0kb upstream 2711 true scaffold_9: 28981897-28984607 Theobroma cacao
Thecc1EG040327 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 28983608-28984607 Theobroma cacao
Thecc1EG040327 1.0kb downstream 1.0kb downstream 2711 true scaffold_9: 28980897-28983607 Theobroma cacao
Thecc1EG040327 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 28980897-28981896 Theobroma cacao
Thecc1EG040327 2.0kb upstream 2.0kb upstream 3711 true scaffold_9: 28981897-28985607 Theobroma cacao
Thecc1EG040327 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 28983608-28985607 Theobroma cacao
Thecc1EG040327 2.0kb downstream 2.0kb downstream 3711 true scaffold_9: 28979897-28983607 Theobroma cacao
Thecc1EG040327 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 28979897-28981896 Theobroma cacao
Thecc1EG040327 5.0kb upstream 5.0kb upstream 6711 true scaffold_9: 28981897-28988607 Theobroma cacao
Thecc1EG040327 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 28983608-28988607 Theobroma cacao
Thecc1EG040327 5.0kb downstream 5.0kb downstream 6711 true scaffold_9: 28976897-28983607 Theobroma cacao
Thecc1EG040327 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 28976897-28981896 Theobroma cacao
Thecc1EG040327 10.0kb upstream 10.0kb upstream 11711 true scaffold_9: 28981897-28993607 Theobroma cacao
Thecc1EG040327 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 28983608-28993607 Theobroma cacao
Thecc1EG040327 10.0kb downstream 10.0kb downstream 11711 true scaffold_9: 28971897-28983607 Theobroma cacao
Thecc1EG040327 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 28971897-28981896 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123822667 5264 Brassicales-Malvales Singleton cluster - no MSA
124318794 5266 SBM Singleton cluster - no MSA
124249281 5268 Malvidae View MSA
124074580 5270 Rosid View MSA
123752607 5271 Pentapetalae View MSA
122796741 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain