Gene : Thecc1EG037599 T. cacao v1.1

Defline:  (1 of 3) PTHR13832//PTHR13832:SF335 - PROTEIN PHOSPHATASE 2C // PROTEIN PHOSPHATASE 2C 16-RELATED Genomic Order:  794
Name:  ? Thecc1EG037599 Secondary Identifier:  ? PAC:27431031

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037599 0.5kb upstream 0.5kb upstream 3802 true scaffold_9: 4337546-4341347 Theobroma cacao
Thecc1EG037599 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 4340848-4341347 Theobroma cacao
Thecc1EG037599 0.5kb downstream 0.5kb downstream 3802 true scaffold_9: 4337046-4340847 Theobroma cacao
Thecc1EG037599 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 4337046-4337545 Theobroma cacao
Thecc1EG037599 1.0kb upstream 1.0kb upstream 4302 true scaffold_9: 4337546-4341847 Theobroma cacao
Thecc1EG037599 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 4340848-4341847 Theobroma cacao
Thecc1EG037599 1.0kb downstream 1.0kb downstream 4302 true scaffold_9: 4336546-4340847 Theobroma cacao
Thecc1EG037599 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 4336546-4337545 Theobroma cacao
Thecc1EG037599 2.0kb upstream 2.0kb upstream 5302 true scaffold_9: 4337546-4342847 Theobroma cacao
Thecc1EG037599 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 4340848-4342847 Theobroma cacao
Thecc1EG037599 2.0kb downstream 2.0kb downstream 5302 true scaffold_9: 4335546-4340847 Theobroma cacao
Thecc1EG037599 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 4335546-4337545 Theobroma cacao
Thecc1EG037599 5.0kb upstream 5.0kb upstream 8302 true scaffold_9: 4337546-4345847 Theobroma cacao
Thecc1EG037599 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 4340848-4345847 Theobroma cacao
Thecc1EG037599 5.0kb downstream 5.0kb downstream 8302 true scaffold_9: 4332546-4340847 Theobroma cacao
Thecc1EG037599 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 4332546-4337545 Theobroma cacao
Thecc1EG037599 10.0kb upstream 10.0kb upstream 13302 true scaffold_9: 4337546-4350847 Theobroma cacao
Thecc1EG037599 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 4340848-4350847 Theobroma cacao
Thecc1EG037599 10.0kb downstream 10.0kb downstream 13302 true scaffold_9: 4327546-4340847 Theobroma cacao
Thecc1EG037599 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 4327546-4337545 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840282 5264 Brassicales-Malvales View MSA
124322698 5266 SBM View MSA
124249250 5268 Malvidae View MSA
124074921 5270 Rosid View MSA
123750242 5271 Pentapetalae View MSA
122786695 5272 Eudicot View MSA
122047066 5273 Angiosperm View MSA
123428982 5275 Viridiplantae View MSA
121349461 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain