Gene : Thecc1EG034548 T. cacao v1.1
Defline:  (1 of 1) PTHR16295 - TRAF-TYPE ZINC FINGER PROTEIN-RELATED Genomic Order:  718
Name:  ? Thecc1EG034548 Secondary Identifier:  ? PAC:27459454
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG034548 0.5kb upstream 0.5kb upstream 4517 true scaffold_8: 3604850-3609366 Theobroma cacao
Thecc1EG034548 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 3608867-3609366 Theobroma cacao
Thecc1EG034548 0.5kb downstream 0.5kb downstream 4517 true scaffold_8: 3604350-3608866 Theobroma cacao
Thecc1EG034548 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 3604350-3604849 Theobroma cacao
Thecc1EG034548 1.0kb upstream 1.0kb upstream 5017 true scaffold_8: 3604850-3609866 Theobroma cacao
Thecc1EG034548 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 3608867-3609866 Theobroma cacao
Thecc1EG034548 1.0kb downstream 1.0kb downstream 5017 true scaffold_8: 3603850-3608866 Theobroma cacao
Thecc1EG034548 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 3603850-3604849 Theobroma cacao
Thecc1EG034548 2.0kb upstream 2.0kb upstream 6017 true scaffold_8: 3604850-3610866 Theobroma cacao
Thecc1EG034548 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 3608867-3610866 Theobroma cacao
Thecc1EG034548 2.0kb downstream 2.0kb downstream 6017 true scaffold_8: 3602850-3608866 Theobroma cacao
Thecc1EG034548 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 3602850-3604849 Theobroma cacao
Thecc1EG034548 5.0kb upstream 5.0kb upstream 9017 true scaffold_8: 3604850-3613866 Theobroma cacao
Thecc1EG034548 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 3608867-3613866 Theobroma cacao
Thecc1EG034548 5.0kb downstream 5.0kb downstream 9017 true scaffold_8: 3599850-3608866 Theobroma cacao
Thecc1EG034548 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 3599850-3604849 Theobroma cacao
Thecc1EG034548 10.0kb upstream 10.0kb upstream 14017 true scaffold_8: 3604850-3618866 Theobroma cacao
Thecc1EG034548 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 3608867-3618866 Theobroma cacao
Thecc1EG034548 10.0kb downstream 10.0kb downstream 14017 true scaffold_8: 3594850-3608866 Theobroma cacao
Thecc1EG034548 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 3594850-3604849 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840352 5264 Brassicales-Malvales View MSA
124338162 5266 SBM View MSA
124242072 5268 Malvidae View MSA
124063211 5270 Rosid View MSA
123738829 5271 Pentapetalae View MSA
122787790 5272 Eudicot View MSA
122048290 5273 Angiosperm View MSA
121347686 5274 Embryophyte View MSA
123380601 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain